You are querying gene by "AT3G52930".

Locus: AT3G52930 Alias: AT3G52930

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G52930 | Chromosome: 3 | Strand: -
Description fructose-bisphosphate aldolase, putative; FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, response to salt stress, pentose-phosphate shunt; LOCATED IN: in 7 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase, putative (TAIR:AT2G36460.1); Has 4403 Blast hits to 4398 proteins in 740 species: Archae - 0; Bacteria - 427; Metazoa - 1257; Fungi - 2; Plants - 339; Viruses - 0; Other Eukaryotes - 2378 (source: NCBI BLink).
Alias
AT3G52930( alias )
Gene model
AT3G52930.1 | From: 19637726 | To: 19640051
Sequence
AT3G52930.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
fructose-bisphosphate aldolase activity PMID:
catalytic activity PMID:
cellular_component
mitochondrial envelope PMID: 12953116
mitochondrion PMID: 12953116
biological_process
pentose-phosphate shunt PMID:
KEGG pathway This gene participates in 4 pathways:
Pathway Enzyme
Glycolysis / Gluconeogenesis fructose-bisphosphate aldolase, class I
Pentose phosphate pathway fructose-bisphosphate aldolase, class I
Fructose and mannose metabolism fructose-bisphosphate aldolase, class I
Carbon fixation fructose-bisphosphate aldolase, class I
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G52930.1 
length: 1911 
miRNA : ath-miR863-5p
length: 21 
 
mfe: -23.6 kcal/mol 
p-value: 0.042160 
 
position  340 
target 5' C       C             C 
           GUUGAGA CAACAG ACGUAA  
           UAACUCU GUUGUU UGUAUU  
miRNA  3'         A      C        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10632
AccessionTaxon
NP_001031721Arabidopsis thaliana
NP_194382Arabidopsis thaliana
NP_194383Arabidopsis thaliana
24459Chlamydomonas reinhardtii
NP_001058042Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_03.0001000046Ostreococcus tauri
estExt_fgenesh1_pg.C_1040052Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_890059Physcomitrella patens subsp. patens
30154.m001149Ricinus communis
152892Chlamydomonas reinhardtii
NP_001031387Arabidopsis thaliana
NP_565508Arabidopsis thaliana
NP_568049Arabidopsis thaliana
NP_001065862Oryza sativa Japonica Group
28623.m000391Ricinus communis
30131.m007128Ricinus communis
NP_178224Arabidopsis thaliana
NP_001041857Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_01.0001000211Ostreococcus tauri
e_gw1.171.101.1Physcomitrella patens subsp. patens
e_gw1.281.108.1Physcomitrella patens subsp. patens
e_gw1.33.186.1Physcomitrella patens subsp. patens
e_gw1.475.41.1Physcomitrella patens subsp. patens
29660.m000779Ricinus communis
NP_181187Arabidopsis thaliana
NP_190861 ( AT3G52930 )Arabidopsis thaliana
NP_568127Arabidopsis thaliana
NP_850759Arabidopsis thaliana
NP_001060880Oryza sativa Japonica Group
29092.m000460Ricinus communis
29988.m000122Ricinus communis
29185Chlamydomonas reinhardtii
fgenesh1_pm.scaffold_39000020Physcomitrella patens subsp. patens
fgenesh2_pm.scaffold_76000020Physcomitrella patens subsp. patens
e_gw1.50.21.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116270.01358IPR000741Fructose-bisphosphate aldolase, class-I
Gene3DG3DSA:3.20.20.700.03355IPR013785Aldolase-type TIM barrel
PfamPF002740.011358IPR000741Fructose-bisphosphate aldolase, class-I
PROSITEPS001580.0217227IPR000741Fructose-bisphosphate aldolase, class-I