You are querying gene by "AT3G51060".

Locus: AT3G51060 Alias: SRS1

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone biosynthesis A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) 20154152
Mutant Hormone biosynthesis A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) 20154152
gibberellinGeneOntology - negative regulation of gibberellic acid mediated signaling

Basic gene information ( show / hide contents )

Locus AT3G51060 | Chromosome: 3 | Strand: +
Description negative regulation of gibberellic acid mediated signaling
Alias
SRS1( alias )
STY1( alias )
Gene model
AT3G51060.1 | From: 18975325 | To: 18977385
Sequence
AT3G51060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein heterodimerization activity PMID: 16740146
transcription factor activity PMID:
cellular_component
nucleus PMID: 12361963
biological_process
xylem and phloem pattern formation PMID: 12361963
style development PMID: 12361963
negative regulation of gibberellic acid mediated signaling PMID:
auxin homeostasis PMID: 16740145
stigma development PMID: 12361963
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
sty1 20154152 mutant
35Spro:STY1-GR 20154152 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G51060.1 
length: 1650 
miRNA : ath-miR847
length: 21 
 
mfe: -26.5 kcal/mol 
p-value: 0.021367 
 
position  290 
target 5' G  G          C   G    A 
           GU GAGGAGGAGG GGA GUGG  
           UA UUCUUCUUCU CCU CACU  
miRNA  3' G  G                     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_50604
AccessionTaxon
NP_190675 ( AT3G51060 )Arabidopsis thaliana
NP_201436Arabidopsis thaliana
NP_001058559Oryza sativa Japonica Group
NP_001063755Oryza sativa Japonica Group
29279.m000131Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF051428e-69138286IPR007818Protein of unknown function DUF702
TIGRFAMTIGR016236.2e-23143185IPR006510Zinc finger, Lateral Root Primordium type 1
TIGRFAMTIGR016242.6e-31237285IPR006511Lateral Root Primordium type 1, C-terminal