You are querying gene by "AT3G50660".

Locus: AT3G50660 Alias: CLM

Hormone Evidence Function category Gene Description PMID
brassinosteroidMutant Hormone biosynthesis steroid 22-alpha-hydroxylase; dwarf mutant 9490746
GeneOntology - response to brassinosteroid stimulus 16407451

Basic gene information ( show / hide contents )

Locus AT3G50660 | Chromosome: 3 | Strand: -
Description steroid 22-alpha-hydroxylase; dwarf mutant
Alias
CLM( alias )
CYP90B1( alias )
DWF4( alias )
SNP2( alias )
Gene model
AT3G50660.1 | From: 18825121 | To: 18828225
Sequence
AT3G50660.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
steroid 22-alpha hydroxylase activity PMID: 11319239
cellular_component
endoplasmic reticulum PMID: 16407451
biological_process
unidimensional cell growth PMID: 9490745
response to brassinosteroid stimulus PMID: 16407451
brassinosteroid biosynthetic process PMID: 9490746
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   brassinosteroid   ]

Genotype PMID Type
dwf4-1 9490746 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G50660.1 
length: 1740 
miRNA : ath-miR847
length: 21 
 
mfe: -30.0 kcal/mol 
p-value: 0.007315 
 
position  845 
target 5' G             A A     A 
           AUCAAGAAGAAGA G AGUGA  
           UAGUUCUUCUUCU C UCACU  
miRNA  3' G             C         
 
 
target: AT3G50660.1 
length: 1740 
miRNA : ath-miR866-3p
length: 20 
 
mfe: -25.7 kcal/mol 
p-value: 0.006169 
 
position  930 
target 5' A     U             A 
           UCUUU GGGAUGGGUUUUG  
           AGAAG UUCUGCCUAAAAC  
miRNA  3'       U             A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24352
AccessionTaxon
NP_001031838Arabidopsis thaliana
NP_001078535Arabidopsis thaliana
NP_196188Arabidopsis thaliana
NP_001065721Oryza sativa Japonica Group
NP_001066117Oryza sativa Japonica Group
e_gw1.281.24.1Physcomitrella patens subsp. patens
e_gw1.83.204.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_24000152Physcomitrella patens subsp. patens
29188.m000051Ricinus communis
NP_190635 ( AT3G50660 )Arabidopsis thaliana
NP_001049447Oryza sativa Japonica Group
29634.m002158Ricinus communis
196671Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR193832.6e-2582483IPR001128Cytochrome P450
Gene3DG3DSA:1.10.630.107.4e-8824492IPR001128Cytochrome P450
SuperFamilySSF482642.2e-9334511IPR001128Cytochrome P450
PfamPF000674.2e-6140493IPR001128Cytochrome P450
PRINTSPR004634.3e-207291IPR002401Cytochrome P450, E-class, group I
PRINTSPR004634.3e-20300317IPR002401Cytochrome P450, E-class, group I
PRINTSPR003856.1e-11311328IPR001128Cytochrome P450
PRINTSPR004634.3e-20320346IPR002401Cytochrome P450, E-class, group I
PRINTSPR004634.3e-20368386IPR002401Cytochrome P450, E-class, group I
PRINTSPR003856.1e-11369380IPR001128Cytochrome P450
PRINTSPR004634.3e-20408432IPR002401Cytochrome P450, E-class, group I
PRINTSPR004634.3e-20452462IPR002401Cytochrome P450, E-class, group I
PRINTSPR003856.1e-11453462IPR001128Cytochrome P450
PROSITEPS00086NA455464IPR017972Cytochrome P450, conserved site
PRINTSPR003856.1e-11462473IPR001128Cytochrome P450
PRINTSPR004634.3e-20462485IPR002401Cytochrome P450, E-class, group I