You are querying gene by "AT3G50280".

Locus: AT3G50280 Alias: DEAR1

Hormone Evidence Function category Gene Description PMID
salicylic acidTransgenic Hormone signal transduction transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: transferase family protein (TAIR:AT3G50300.1); Has 1311 Blast hits to 1305 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 126; Plants - 1179; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 19618250

Basic gene information ( show / hide contents )

Locus AT3G50280 | Chromosome: 3 | Strand: +
Description transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: transferase family protein (TAIR:AT3G50300.1); Has 1311 Blast hits to 1305 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 126; Plants - 1179; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Alias
DEAR1( alias )
Gene model
AT3G50280.1 | From: 18648836 | To: 18650167
Sequence
AT3G50280.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transferase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
DEAR1ox 19618250 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G50280.1 
length: 1332 
miRNA : ath-miR843
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.031763 
 
position  1173 
target 5' A     A C       G     C 
           CCGAU G GGUUCGA CUGGA  
           GGUUA C UCGAGCU GAUUU  
miRNA  3' A       U       G       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24291
AccessionTaxon
NP_190596Arabidopsis thaliana
NP_190597 ( AT3G50280 )Arabidopsis thaliana
NP_190598Arabidopsis thaliana
NP_190599Arabidopsis thaliana
NP_201516Arabidopsis thaliana
NP_198629Arabidopsis thaliana
NP_201517Arabidopsis thaliana
NP_001060826Oryza sativa Japonica Group
NP_001060827Oryza sativa Japonica Group
NP_001060828Oryza sativa Japonica Group
NP_001060829Oryza sativa Japonica Group
29644.m000175Ricinus communis
29785.m000961Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF024587.999999999999934E-723430IPR003480Transferase