You are querying gene by "AT3G50060".

Locus: AT3G50060 Alias: MYB77

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
auxinTransgenic Hormone signal transduction MYB77 interacts with ARF7 17675404
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT3G50060 | Chromosome: 3 | Strand: -
Description MYB77 interacts with ARF7
Alias
MYB77( alias )
Gene model
AT3G50060.1 | From: 18568955 | To: 18570089
Sequence
AT3G50060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
regulation of transcription, DNA-dependent PMID: 9839469
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
lateral root development PMID: 17675404
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
myb77-ox 17675404 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G50060.1 
length: 1137 
miRNA : ath-miR836
length: 24 
 
mfe: -29.5 kcal/mol 
p-value: 0.007949 
 
position  356 
target 5' U      U A             C  A 
           CUACGC U AGAGGAAAUGCAG GG  
           GGUGCG A UUUCCUUUGUGUC CU  
miRNA  3'        U G                  
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70203
AccessionTaxon
NP_190575 ( AT3G50060 )Arabidopsis thaliana
NP_201531Arabidopsis thaliana
29970.m000987Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS512940.0156IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PANTHERPTHR106410.02287IPR015495Myb transcription factor
Gene3DG3DSA:1.10.10.606.900014785634992E-17455IPR012287Homeodomain-related
SMARTSM007171.7999975402237507E-18554IPR001005SANT, DNA-binding
PfamPF002491.9E-14651IPR014778Myb, DNA-binding
SuperFamilySSF466894.4E-18657IPR009057Homeodomain-like
SuperFamilySSF466897.4E-1554107IPR009057Homeodomain-like
SMARTSM007172.39999798157265E-1457105IPR001005SANT, DNA-binding
PROSITEPS512940.058107IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.604.0000030086991574E-1459107IPR012287Homeodomain-related
PfamPF002491.600000000000001E-1160102IPR014778Myb, DNA-binding