You are querying gene by "AT3G47600".

Locus: AT3G47600 Alias: ATMYB94

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
ethyleneGeneOntology - response to ethylene stimulus 16463103
auxinGeneOntology - response to auxin stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT3G47600 | Chromosome: 3 | Strand: -
Description response to ethylene stimulus
Alias
ATMYB94( alias )
ATMYBCP70( alias )
MYB94( alias )
Gene model
AT3G47600.1 | From: 17550323 | To: 17552215
Sequence
AT3G47600.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to auxin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G47600.1 
length: 1486 
miRNA : ath-miR832-5p
length: 21 
 
mfe: -29.8 kcal/mol 
p-value: 0.007909 
 
position  751 
target 5' U    U               U 
           UUUC AUUCCCGAUCUUGGU  
           AAAG UAAGGGCUAGGGUCG  
miRNA  3'      C               U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51556
AccessionTaxon
NP_190344 ( AT3G47600 )Arabidopsis thaliana
NP_201053Arabidopsis thaliana
NP_851248Arabidopsis thaliana
NP_001063167Oryza sativa Japonica Group
30138.m004082Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106415.899988094056823E-963216IPR015495Myb transcription factor
PROSITEPS512940.0965IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.601.2999992446818318E-151264IPR012287Homeodomain-related
SMARTSM007171.5999988934925166E-151363IPR001005SANT, DNA-binding
PfamPF002493.2E-131461IPR014778Myb, DNA-binding
SuperFamilySSF466899.4E-221483IPR009057Homeodomain-like
SMARTSM007173.899998617952183E-1666114IPR001005SANT, DNA-binding
PROSITEPS512940.066116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002495.299999999999987E-1067112IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.604.799997768362451E-1668116IPR012287Homeodomain-related
SuperFamilySSF466895.0E-1186120IPR009057Homeodomain-like