You are querying gene by "AT3G46590".

Locus: AT3G46590 Alias: ATTRP2

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
ethyleneGeneOntology - response to ethylene stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT3G46590 | Chromosome: 3 | Strand: +
Description response to jasmonic acid stimulus
ATTRP2( alias )
TRFL1( alias )
Gene model
AT3G46590.1 | From: 17163760 | To: 17167170
AT3G46590.2 | From: 17163760 | To: 17167212
AT3G46590.3 | From: 17163760 | To: 17167151
AT3G46590.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G46590.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G46590.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
telomeric DNA binding PMID: 15688221
DNA binding PMID:
DNA bending activity PMID: 15688221
nucleus PMID:
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT3G46590.1 
length: 2274 
miRNA : ath-miR775
length: 20 
mfe: -26.6 kcal/mol 
p-value: 0.024066 
position  977 
target 5' U                    A 
miRNA  3'       G C              
target: AT3G46590.2 
length: 2319 
miRNA : ath-miR775
length: 20 
mfe: -26.6 kcal/mol 
p-value: 0.024667 
position  980 
target 5' U                    A 
miRNA  3'       G C              
target: AT3G46590.3 
length: 2240 
miRNA : ath-miR775
length: 20 
mfe: -26.6 kcal/mol 
p-value: 0.023612 
position  980 
target 5' U                    A 
miRNA  3'       G C              

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_33909
NP_001030821Arabidopsis thaliana
NP_001030822Arabidopsis thaliana
NP_001078770Arabidopsis thaliana
NP_001078771Arabidopsis thaliana
NP_190243 ( AT3G46590 )Arabidopsis thaliana
NP_200751Arabidopsis thaliana
NP_851221Arabidopsis thaliana
e_gw1.132.51.1Physcomitrella patens subsp. patens
gw1.98.100.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS500530.0279347IPR019955Ubiquitin supergroup
PROSITEPS500530.0284352IPR019955Ubiquitin supergroup
PROSITEPS500539.809285353IPR019955Ubiquitin supergroup
PROSITEPS512940.0442501IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007173.099999458993703E-7446499IPR001005SANT, DNA-binding
PROSITEPS512940.0447506IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PROSITEPS5129415.568448507IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007173.099999458993703E-7451504IPR001005SANT, DNA-binding
SMARTSM007175.4e-07452505IPR001005SANT, DNA-binding