You are querying gene by "AT3G46130".

Locus: AT3G46130 Alias: ATMYB48

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
ethyleneGeneOntology - response to ethylene stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT3G46130 | Chromosome: 3 | Strand: +
Description response to jasmonic acid stimulus
Alias
ATMYB48( alias )
MYB111( alias )
Gene model
AT3G46130.1 | From: 16956418 | To: 16957361
AT3G46130.2 | From: 16956349 | To: 16957446
AT3G46130.3 | From: 16956418 | To: 16957361
Sequence
AT3G46130.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G46130.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G46130.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
regulation of transcription, DNA-dependent PMID: 11597504
response to salt stress PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to gibberellin stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
regulation of transcription PMID: 11118137
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G46130.1 
length: 771 
miRNA : ath-miR858
length: 21 
 
mfe: -32.0 kcal/mol 
p-value: 0.000380 
 
position  275 
target 5' C   A                U 
           GGG CGAACGGAUAACGAGA  
           UCC GCUUGUCUGUUGCUUU  
miRNA  3' U   A                  
 
 
target: AT3G46130.2 
length: 995 
miRNA : ath-miR858
length: 21 
 
mfe: -32.0 kcal/mol 
p-value: 0.000574 
 
position  414 
target 5' C   A                U 
           GGG CGAACGGAUAACGAGA  
           UCC GCUUGUCUGUUGCUUU  
miRNA  3' U   A                  
 
 
target: AT3G46130.3 
length: 713 
miRNA : ath-miR858
length: 21 
 
mfe: -32.0 kcal/mol 
p-value: 0.000333 
 
position  217 
target 5' C   A                U 
           GGG CGAACGGAUAACGAGA  
           UCC GCUUGUCUGUUGCUUU  
miRNA  3' U   A                  
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_33908
AccessionTaxon
NP_001030816Arabidopsis thaliana
NP_001078249Arabidopsis thaliana
NP_190199 ( AT3G46130 )Arabidopsis thaliana
NP_851225Arabidopsis thaliana
NP_851226Arabidopsis thaliana
NP_200786Arabidopsis thaliana
NP_001067061Oryza sativa Japonica Group
NP_001068517Oryza sativa Japonica Group
29788.m000340Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS500900.0126IPR017877MYB-like
Gene3DG3DSA:1.10.10.602.70000183580768E-14147IPR012287Homeodomain-related
PANTHERPTHR106417.499996058513585E-301122IPR015495Myb transcription factor
SMARTSM007171.8000014928719636E-12145IPR001005SANT, DNA-binding
PROSITEPS512940.0147IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002491.600000000000001E-11243IPR014778Myb, DNA-binding
SuperFamilySSF466893.3E-12247IPR009057Homeodomain-like
PROSITEPS5129417.270456IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PANTHERPTHR106415.1e-725245IPR015495Myb transcription factor
Gene3DG3DSA:1.10.10.605.4e-14759IPR012287Homeodomain-related
SMARTSM007175.2e-16858IPR001005SANT, DNA-binding
PfamPF002497.9e-16956IPR014778Myb, DNA-binding
SuperFamilySSF466891.7e-20979IPR009057Homeodomain-like
PANTHERPTHR106417.099983251124782E-549215IPR015495Myb transcription factor
PROSITEPS512940.02781IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SuperFamilySSF466896.8E-162881IPR009057Homeodomain-like
SMARTSM007171.2000011745813376E-173179IPR001005SANT, DNA-binding
PfamPF002491.3000000000000007E-123277IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.4999997758334064E-163381IPR012287Homeodomain-related
PROSITEPS5129427.81457111IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007172.2e-1761109IPR001005SANT, DNA-binding
PfamPF002492e-1562107IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.4e-1663111IPR012287Homeodomain-related
SuperFamilySSF466891.6e-0981110IPR009057Homeodomain-like