You are querying gene by "AT3G46060".

Locus: AT3G46060 Alias: ARA-3

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 12692329

Basic gene information ( show / hide contents )

Locus AT3G46060 | Chromosome: 3 | Strand: +
Description ethylene mediated signaling pathway
Alias
ARA-3( alias )
ARA3( alias )
ATRAB8A( alias )
ATRABE1C( alias )
Gene model
AT3G46060.1 | From: 16928574 | To: 16931003
AT3G46060.2 | From: 16928680 | To: 16931003
Sequence
AT3G46060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G46060.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
GTP binding PMID:
biological_process
ethylene mediated signaling pathway PMID: 12692329
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G46060.1 
length: 1132 
miRNA : ath-miR773
length: 21 
 
mfe: -25.5 kcal/mol 
p-value: 0.018305 
 
position  796 
target 5' C   C    C             G 
           GGA CAAG AGCUGG AGCAGG  
           UCU GUUU UCGACC UCGUUU  
miRNA  3' C               U        
 
 
target: AT3G46060.2 
length: 1142 
miRNA : ath-miR773
length: 21 
 
mfe: -25.5 kcal/mol 
p-value: 0.018494 
 
position  806 
target 5' C   C    C             G 
           GGA CAAG AGCUGG AGCAGG  
           UCU GUUU UCGACC UCGUUU  
miRNA  3' C               U        
 
 
target: AT3G46060.3 
length: 1061 
miRNA : ath-miR773
length: 21 
 
mfe: -25.5 kcal/mol 
p-value: 0.016963 
 
position  728 
target 5' C   C    C             G 
           GGA CAAG AGCUGG AGCAGG  
           UCU GUUU UCGACC UCGUUU  
miRNA  3' C               U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10784
AccessionTaxon
NP_001078248Arabidopsis thaliana
NP_001078278Arabidopsis thaliana
NP_001118780 ( AT3G46060 )Arabidopsis thaliana
NP_190192Arabidopsis thaliana
NP_190929Arabidopsis thaliana
NP_200792Arabidopsis thaliana
NP_850696Arabidopsis thaliana
195520Chlamydomonas reinhardtii
NP_001051716Oryza sativa Japonica Group
NP_001059259Oryza sativa Japonica Group
e_gw1.05.00.432.1Ostreococcus tauri
estExt_Genewise1.C_2180059Physcomitrella patens subsp. patens
estExt_Genewise1.C_810021Physcomitrella patens subsp. patens
estExt_Genewise1.C_810024Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1130070Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_880180Physcomitrella patens subsp. patens
28449.m000019Ricinus communis
29154.m000216Ricinus communis
NP_187601Arabidopsis thaliana
NP_195972Arabidopsis thaliana
NP_001055761Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS514190.011214IPR020851Small GTPase
TIGRFAMTIGR002317.799983041255708E-2713175IPR005225Small GTP-binding protein
PRINTSPR004495.000009099153538E-461637IPR001806Ras GTPase
SMARTSM001751.5999883531364445E-10516180IPR003579Ras small GTPase, Rab type
PfamPF000713.099999999999981E-6317178IPR013753Ras
PRINTSPR004495.000009099153538E-463955IPR001806Ras GTPase
PRINTSPR004495.000009099153538E-465779IPR001806Ras GTPase
PRINTSPR004495.000009099153538E-46119132IPR001806Ras GTPase
PRINTSPR004495.000009099153538E-46155177IPR001806Ras GTPase