You are querying gene by "AT3G43300".

Locus: AT3G43300 Alias: ATMIN7

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone transportion AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. 19230664

Basic gene information ( show / hide contents )

Locus AT3G43300 | Chromosome: 3 | Strand: -
Description AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.
Alias
ATMIN7( alias )
Gene model
AT3G43300.1 | From: 15244884 | To: 15256022
Sequence
AT3G43300.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID: 16840699
guanyl-nucleotide exchange factor activity PMID:
cellular_component
intracellular PMID:
biological_process
defense response to bacterium PMID: 16840699
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
ben1-1 19230664 mutant
ben1-2 19230664 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G43300.1 
length: 5616 
miRNA : ath-miR830*
length: 22 
 
mfe: -23.4 kcal/mol 
p-value: 0.026200 
 
position  402 
target 5' U     U   C      A      U 
           GCCUA GAU AUUUGG AGGGGA  
           UGGAU UUG UAAACC UCUUCU  
miRNA  3' U         A               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11091
AccessionTaxon
NP_171698Arabidopsis thaliana
NP_189916 ( AT3G43300 )Arabidopsis thaliana
NP_191645Arabidopsis thaliana
NP_195264Arabidopsis thaliana
NP_195533Arabidopsis thaliana
148829Chlamydomonas reinhardtii
NP_001049545Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_04.00010298Ostreococcus tauri
e_gw1.19.10.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_2640056Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_110056Physcomitrella patens subsp. patens
gw1.382.34.1Physcomitrella patens subsp. patens
29739.m003662Ricinus communis
30174.m008901Ricinus communis
NP_001058101Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF483716.3e-15971384IPR016024Armadillo-type fold
PROSITEPS5019041.207591778IPR000904SEC7-like
SuperFamilySSF484255.6e-73593792IPR000904SEC7-like
SMARTSM002225.8e-74595780IPR000904SEC7-like
PfamPF013693.6e-61596780IPR000904SEC7-like
PfamPF093245e-2610911176IPR015403Protein of unknown function DUF1981, SEC7 associated