You are querying gene by "AT3G29030".

Locus: AT3G29030 Alias: ATEXP5

Hormone Evidence Function category Gene Description PMID
BrassinosteroidMutant Hormone signal transduction Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) 20035956

Basic gene information ( show / hide contents )

Locus AT3G29030 | Chromosome: 3 | Strand: -
Description Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias
ATEXP5( alias )
ATEXPA5( alias )
ATHEXP ALPHA 1.4( alias )
Gene model
AT3G29030.1 | From: 11012545 | To: 11014595
Sequence
AT3G29030.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
endomembrane system PMID:
extracellular region PMID:
biological_process
unidimensional cell growth PMID:
plant-type cell wall modification during multidimensional cell growth PMID: 7568110
plant-type cell wall loosening PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   Brassinosteroid   ]

Genotype PMID Type
expA5-1 20035956 mutant
bzr1-1D expA5-1 20035956 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G29030.1 
length: 1288 
miRNA : ath-miR396a
length: 21 
 
mfe: -24.2 kcal/mol 
p-value: 0.030432 
 
position  752 
target 5' U    G    A     G      U 
           CGGU CAAG GAAGU GUGGGA  
           GUCA GUUC UUUCG CACCUU  
miRNA  3'      A          A        
 
 
target: AT3G29030.1 
length: 1288 
miRNA : ath-miR859
length: 21 
 
mfe: -27.8 kcal/mol 
p-value: 0.004714 
 
position  277 
target 5' U               U     U 
           UUUG CUUCACAACA GGGAG  
           AAAC GAAGUGUUGU CUCUC  
miRNA  3'      U                U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:2.40.40.404.9e-4320154IPR014734Pollen allergen, N-terminal
SuperFamilySSF506852.6e-4322161IPR009009Barwin-related endoglucanase
PRINTSPR012253.4e-473752IPR007118Expansin/Lol pI
PRINTSPR012253.4e-475573IPR007118Expansin/Lol pI
PROSITEPS5084229.00656161IPR007112Expansin 45, endoglucanase-like
PRINTSPR012262.6e-766882IPR002963Expansin
PfamPF033304.8e-2573151IPR005132Rare lipoprotein A
PRINTSPR012253.4e-477795IPR007118Expansin/Lol pI
PRINTSPR012262.6e-7695106IPR002963Expansin
PRINTSPR012262.6e-76108118IPR002963Expansin
PRINTSPR012262.6e-76119136IPR002963Expansin
PRINTSPR012262.6e-76136149IPR002963Expansin
PRINTSPR012253.4e-47144160IPR007118Expansin/Lol pI
SuperFamilySSF495904.1e-33158250IPR007117Pollen allergen/expansin, C-terminal
Gene3DG3DSA:2.60.40.7602.6e-09159252IPR007117Pollen allergen/expansin, C-terminal
PRINTSPR012262.6e-76160172IPR002963Expansin
PfamPF013572.4e-27162239IPR007117Pollen allergen/expansin, C-terminal
PROSITEPS5084320.964171250IPR007117Pollen allergen/expansin, C-terminal
PRINTSPR012262.6e-76172193IPR002963Expansin
PRINTSPR012253.4e-47198212IPR007118Expansin/Lol pI
PRINTSPR012262.6e-76207228IPR002963Expansin
PRINTSPR012253.4e-47236250IPR007118Expansin/Lol pI
PRINTSPR012262.6e-76236252IPR002963Expansin