You are querying gene by "AT3G28910".

Locus: AT3G28910 Alias: ATMYB30

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
ethyleneGeneOntology - response to ethylene stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
auxinGeneOntology - response to auxin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
BrassinosteroidMutant Hormone signal transduction transcription factor myb homologue 19170933

Basic gene information ( show / hide contents )

Locus AT3G28910 | Chromosome: 3 | Strand: +
Description response to gibberellin stimulus
Alias
ATMYB30( alias )
MYB30( alias )
Gene model
AT3G28910.1 | From: 10912394 | To: 10914427
Sequence
AT3G28910.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 10571865
biological_process
response to auxin stimulus PMID: 16463103
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
plant-type hypersensitive response PMID: 10571865
response to salt stress PMID: 16463103
response to bacterium PMID: 10571865
very-long-chain fatty acid biosynthetic process PMID: 18326828
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   Brassinosteroid   ]

Genotype PMID Type
atmyb30 19170933 mutant
bri1 atmyb30 19170933 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G28910.1 
length: 1592 
miRNA : ath-miR828
length: 22 
 
mfe: -24.3 kcal/mol 
p-value: 0.004293 
 
position  607 
target 5' U     C         A       A 
           UGGAA ACUCAUUUG AG AAGA  
           ACCUU UGAGUAAAU UC UUCU  
miRNA  3'       A            G      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106414.99996518094157E-923159IPR015495Myb transcription factor
PROSITEPS512940.0961IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.609.500010281672572E-151264IPR012287Homeodomain-related
SMARTSM007179.200004346620566E-151363IPR001005SANT, DNA-binding
PfamPF002497.0000000000000025E-121461IPR014778Myb, DNA-binding
SuperFamilySSF466892.2E-211483IPR009057Homeodomain-like
PROSITEPS512940.062116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007171.3999989204987804E-1566114IPR001005SANT, DNA-binding
PfamPF002491.4999999999999992E-1067112IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.604.999998119564087E-1668116IPR012287Homeodomain-related
SuperFamilySSF466891.3E-1186146IPR009057Homeodomain-like