You are querying gene by "AT3G28580".

Locus: AT3G28580 Alias: AT3G28580

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16258012

Basic gene information ( show / hide contents )

Locus AT3G28580 | Chromosome: 3 | Strand: +
Description response to abscisic acid stimulus
Alias
AT3G28580( alias )
Gene model
AT3G28580.1 | From: 10716860 | To: 10718566
Sequence
AT3G28580.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ATP binding PMID:
ATPase activity PMID:
cellular_component
endoplasmic reticulum PMID: 16618929
biological_process
response to abscisic acid stimulus PMID: 16258012
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G28580.1 
length: 1707 
miRNA : ath-miR414
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.000676 
 
position  1096 
target 5' A  A             A    A 
           GA GAUGAUGAUGAAG AUGA  
           CU CUACUACUACUUC UACU  
miRNA  3' A  G                    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27518
AccessionTaxon
NP_001066678Oryza sativa Japonica Group
NP_001067387Oryza sativa Japonica Group
NP_001067388Oryza sativa Japonica Group
NP_001030789Arabidopsis thaliana
NP_189492Arabidopsis thaliana
NP_189493Arabidopsis thaliana
NP_189495Arabidopsis thaliana
29822.m003444Ricinus communis
30147.m014045Ricinus communis
NP_189499 ( AT3G28580 )Arabidopsis thaliana
NP_198817Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003822.79999889404114E-7239395IPR003593ATPase, AAA+ type, core
PfamPF000047.099999999999995E-13244392IPR003959ATPase, AAA-type, core
PROSITEPS006740.0363381IPR003960ATPase, AAA-type, conserved site