You are querying gene by "AT3G28470".

Locus: AT3G28470 Alias: ATMYB35

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G28470 | Chromosome: 3 | Strand: -
Description Member of the R2R3 factor gene family.
Alias
ATMYB35( alias )
TDF1( alias )
Gene model
AT3G28470.1 | From: 10675745 | To: 10676961
Sequence
AT3G28470.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G28470.1 
length: 1025 
miRNA : ath-miR854a
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.008343 
 
position  958 
target 5' C               G     A 
           CUUCUUUUCCCUAUU UUGUU  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT3G28470.1 
length: 1025 
miRNA : ath-miR854b
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.006525 
 
position  958 
target 5' C               G     A 
           CUUCUUUUCCCUAUU UUGUU  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT3G28470.1 
length: 1025 
miRNA : ath-miR854c
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.007754 
 
position  958 
target 5' C               G     A 
           CUUCUUUUCCCUAUU UUGUU  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT3G28470.1 
length: 1025 
miRNA : ath-miR854d
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.006742 
 
position  958 
target 5' C               G     A 
           CUUCUUUUCCCUAUU UUGUU  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT3G28470.1 
length: 1025 
miRNA : ath-miR854e
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.008106 
 
position  958 
target 5' C               G     A 
           CUUCUUUUCCCUAUU UUGUU  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106414.69998262512756E-1083251IPR015495Myb transcription factor
PROSITEPS512940.0965IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.605.299996575502399E-161264IPR012287Homeodomain-related
SMARTSM007171.29999924468179E-161363IPR001005SANT, DNA-binding
PfamPF002497.000000000000002E-131461IPR014778Myb, DNA-binding
SuperFamilySSF466891.7E-221483IPR009057Homeodomain-like
SMARTSM007172.2999993566538008E-1466114IPR001005SANT, DNA-binding
PROSITEPS512940.066116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.604.199997713396018E-1568116IPR012287Homeodomain-related
PfamPF002494.500000000000003E-1169110IPR014778Myb, DNA-binding
SuperFamilySSF466891.4E-1186146IPR009057Homeodomain-like