You are querying gene by "AT3G26810".

Locus: AT3G26810 Alias: AFB2

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone receptor TIR1 homolog F-box protein 15992545
GeneOntology - auxin binding 15917797

Basic gene information ( show / hide contents )

Locus AT3G26810 | Chromosome: 3 | Strand: +
Description TIR1 homolog F-box protein
Alias
AFB2( alias )
Gene model
AT3G26810.1 | From: 9869082 | To: 9871877
Sequence
AT3G26810.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
auxin binding PMID: 15917797
ubiquitin-protein ligase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
response to molecule of bacterial origin PMID: 16627744
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
tir1 afb1 afb2 afb3 15992545 mutant
afb2 15992545 mutant
tir1 afb2 afb3 15992545 mutant
wxr1 tir1-1 afb2-1 afb3-1 20562234 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G26810.1 
length: 2401 
miRNA : ath-miR1888
length: 21 
 
mfe: -22.0 kcal/mol 
p-value: 0.030129 
 
position  952 
target 5' A                    C 
           UCUUCG GGAUCUUGAUUUG  
           AGAAGU UUUAGAAUUGAAU  
miRNA  3' A      G               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24415
AccessionTaxon
NP_563915Arabidopsis thaliana
NP_566800 ( AT3G26810 )Arabidopsis thaliana
NP_567135Arabidopsis thaliana
NP_567255Arabidopsis thaliana
NP_001052659Oryza sativa Japonica Group
NP_001054666Oryza sativa Japonica Group
estExt_fgenesh1_pm.C_160001Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_440022Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1370051Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1960072Physcomitrella patens subsp. patens
29647.m002022Ricinus communis
29933.m001427Ricinus communis
30131.m006863Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM002567.399999679089141E-5445IPR001810F-box domain, cyclin-like