You are querying gene by "AT3G23770".

Locus: AT3G23770 Alias: AT3G23770

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G23770 | Chromosome: 3 | Strand: +
Description glycosyl hydrolase family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: MEE48 (maternal effect embryo arrest 48); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (TAIR:AT4G14080.1); Has 1757 Blast hits to 1704 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 1732; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Alias
AT3G23770( alias )
Gene model
AT3G23770.1 | From: 8565501 | To: 8567503
Sequence
AT3G23770.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
hydrolase activity, hydrolyzing O-glycosyl compounds PMID:
cellular_component
endomembrane system PMID:
biological_process
carbohydrate metabolic process PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G23770.1 
length: 1793 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.018236 
 
position  66 
target 5' A        G      U    U  A 
           CUCCUUUU CUCUGU CCUC UC  
           GAGGAGGA GGGAUA GGAG AG  
miRNA  3'                      U    
 
 
target: AT3G23770.1 
length: 1793 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.016519 
 
position  66 
target 5' A        G      U    U  A 
           CUCCUUUU CUCUGU CCUC UC  
           GAGGAGGA GGGAUA GGAG AG  
miRNA  3'                      U    
 
 
target: AT3G23770.1 
length: 1793 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.018049 
 
position  66 
target 5' A        G      U    U  A 
           CUCCUUUU CUCUGU CCUC UC  
           GAGGAGGA GGGAUA GGAG AG  
miRNA  3'                      U    
 
 
target: AT3G23770.1 
length: 1793 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.016817 
 
position  66 
target 5' A        G      U    U  A 
           CUCCUUUU CUCUGU CCUC UC  
           GAGGAGGA GGGAUA GGAG AG  
miRNA  3'                      U    
 
 
target: AT3G23770.1 
length: 1793 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.018710 
 
position  66 
target 5' A        G      U    U  A 
           CUCCUUUU CUCUGU CCUC UC  
           GAGGAGGA GGGAUA GGAG AG  
miRNA  3'                      U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_18794
AccessionTaxon
NP_001154780Arabidopsis thaliana
NP_194413Arabidopsis thaliana
NP_568822Arabidopsis thaliana
e_gw1.312.61.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_218000001Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_399000006Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_270000010Physcomitrella patens subsp. patens
29762.m000502Ricinus communis
29948.m000713Ricinus communis
NP_178637Arabidopsis thaliana
NP_001048260Oryza sativa Japonica Group
NP_189019 ( AT3G23770 )Arabidopsis thaliana
NP_193144Arabidopsis thaliana
NP_001051879Oryza sativa Japonica Group
NP_001062294Oryza sativa Japonica Group
NP_001063586Oryza sativa Japonica Group
30157.m000802Ricinus communis
NP_683538Arabidopsis thaliana
28401.m000073Ricinus communis
e_gw1.6.320.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1500012Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_51000003Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.20.20.801.6999880237079648E-10637361IPR013781Glycoside hydrolase, subgroup, catalytic core
PfamPF003322.399999999999967E-10637361IPR000490Glycoside hydrolase, family 17
SuperFamilySSF514456.3E-10137361IPR017853Glycoside hydrolase, catalytic core
PROSITEPS005870.0272285IPR000490Glycoside hydrolase, family 17
SMARTSM007681.4000050690730921E-36386471IPR012946X8
PfamPF079833.7999999999999984E-23387471IPR012946X8