You are querying gene by "AT3G23250".

Locus: AT3G23250 Alias: ATMYB15

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
auxinGeneOntology - response to auxin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT3G23250 | Chromosome: 3 | Strand: +
Description response to jasmonic acid stimulus
Alias
ATMYB15( alias )
ATY19( alias )
MYB15( alias )
Gene model
AT3G23250.1 | From: 8309216 | To: 8310833
AT3G23250.2 | From: 8309217 | To: 8310833
Sequence
AT3G23250.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G23250.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to auxin stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
regulation of transcription, DNA-dependent PMID: 9839469
response to salt stress PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G23250.1 
length: 1343 
miRNA : ath-miR844*
length: 21 
 
mfe: -22.6 kcal/mol 
p-value: 0.021491 
 
position  1066 
target 5' U              A   C   U 
           GAC AGUGAGAUGG CUU UGG  
           UUG UCAUUCUACC GAA AUU  
miRNA  3'     A              U     
 
 
target: AT3G23250.2 
length: 1421 
miRNA : ath-miR844*
length: 21 
 
mfe: -22.6 kcal/mol 
p-value: 0.023304 
 
position  1144 
target 5' U              A   C   U 
           GAC AGUGAGAUGG CUU UGG  
           UUG UCAUUCUACC GAA AUU  
miRNA  3'     A              U     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51048
AccessionTaxon
NP_001030747Arabidopsis thaliana
NP_188966 ( AT3G23250 )Arabidopsis thaliana
NP_001047474Oryza sativa Japonica Group
NP_001053318Oryza sativa Japonica Group
NP_001064861Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106412.1999990098072738E-511156IPR015495Myb transcription factor
PANTHERPTHR106418.299941133692185E-1023213IPR015495Myb transcription factor
PROSITEPS512940.0559IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SuperFamilySSF466892.3E-16659IPR009057Homeodomain-like
SMARTSM007174.199997713395806E-15957IPR001005SANT, DNA-binding
PROSITEPS512940.0961IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002493.2E-111055IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.609.500010281672572E-181159IPR012287Homeodomain-related
Gene3DG3DSA:1.10.10.603.599996434360067E-151264IPR012287Homeodomain-related
SMARTSM007171.0E-121363IPR001005SANT, DNA-binding
PfamPF002492.3999999999999998E-111461IPR014778Myb, DNA-binding
SuperFamilySSF466891.2E-221483IPR009057Homeodomain-like
PROSITEPS512940.062116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007174.199997713395806E-1566114IPR001005SANT, DNA-binding
PfamPF002494.599999999999999E-1167112IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.609.500010281672572E-1868116IPR012287Homeodomain-related
SuperFamilySSF466891.9E-973123IPR009057Homeodomain-like