You are querying gene by "AT3G19770".

Locus: AT3G19770 Alias: AtVPS9A

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G19770 | Chromosome: 3 | Strand: +
Description Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.
Alias
AtVPS9A( alias )
VPS9A( alias )
Gene model
AT3G19770.1 | From: 6866812 | To: 6869481
AT3G19770.2 | From: 6866812 | To: 6869485
Sequence
AT3G19770.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G19770.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
Rho guanyl-nucleotide exchange factor activity PMID: 18055610
cellular_component
endomembrane system PMID:
biological_process
transport PMID:
cell plate formation PMID: 18055610
post-embryonic root development PMID: 18055610
cell wall biogenesis PMID: 18055610
embryonic development PMID: 18055610
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11982
AccessionTaxon
NP_001051858Oryza sativa Japonica Group
1500010237Ostreococcus tauri
NP_001030728Arabidopsis thaliana
NP_566645 ( AT3G19770 )Arabidopsis thaliana
173295Chlamydomonas reinhardtii
estExt_gwp_gw1.C_490168Physcomitrella patens subsp. patens
29908.m006221Ricinus communis
NP_196494Arabidopsis thaliana
NP_001049631Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS512050.01110IPR003123Vacuolar sorting protein 9
PfamPF022048.70000000000003E-283105IPR003123Vacuolar sorting protein 9
SMARTSM001675.100010023582437E-293118IPR013995Vacuolar sorting protein 9, subgroup
PROSITEPS512050.0102246IPR003123Vacuolar sorting protein 9
SMARTSM001679.800002721302184E-31135254IPR013995Vacuolar sorting protein 9, subgroup
PfamPF022048.100000000000005E-28137241IPR003123Vacuolar sorting protein 9