You are querying gene by "AT3G16857".

Locus: AT3G16857 Alias: ARR1

Hormone Evidence Function category Gene Description PMID
cytokininTransgenic Hormone signal transduction Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway 11691951
Mutant Hormone signal transduction Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway 11691951
GeneOntology - response to cytokinin stimulus 16227453

Basic gene information ( show / hide contents )

Locus AT3G16857 | Chromosome: 3 | Strand: +
Description Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway
Alias
ARR1( alias )
Gene model
AT3G16857.1 | From: 5755930 | To: 5759004
AT3G16857.2 | From: 5755877 | To: 5759449
Sequence
AT3G16857.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G16857.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
two-component response regulator activity PMID:
biological_process
cytokinin mediated signaling PMID: 12068096
response to cytokinin stimulus PMID: 16227453
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
35S::ARR1 11691951 transgenic
35S::ARR1DeltaDDK 11691951 transgenic
arr1-1 11691951 mutant
arr1 arr10 arr12 17132632 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G16857.1 
length: 2344 
miRNA : ath-miR167a
length: 21 
 
mfe: -26.7 kcal/mol 
p-value: 0.030936 
 
position  219 
target 5' C               G C  G 
           GGAUCG GCUGGUGG U CA  
           UCUAGU CGACCGUC A GU  
miRNA  3' A      A        G A    
 
 
target: AT3G16857.1 
length: 2344 
miRNA : ath-miR167b
length: 21 
 
mfe: -26.7 kcal/mol 
p-value: 0.024553 
 
position  219 
target 5' C               G C  G 
           GGAUCG GCUGGUGG U CA  
           UCUAGU CGACCGUC A GU  
miRNA  3' A      A        G A    
 
 
target: AT3G16857.1 
length: 2344 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.058936 
 
position  850 
target 5' G    A          A    A 
           GAGA GAGCAAGGAG UGAU  
           CUUU CUUGUUCUUU ACUA  
miRNA  3' A    G          G      
 
 
target: AT3G16857.1 
length: 2344 
miRNA : ath-miR847
length: 21 
 
mfe: -30.9 kcal/mol 
p-value: 0.007204 
 
position  645 
target 5' A              A     A 
           GUUAGGAAGAGGAG AGUGA  
           UAGUUCUUCUUCUC UCACU  
miRNA  3' G              C       
 
 
target: AT3G16857.2 
length: 2669 
miRNA : ath-miR167a
length: 21 
 
mfe: -26.7 kcal/mol 
p-value: 0.035509 
 
position  322 
target 5' C               G C  G 
           GGAUCG GCUGGUGG U CA  
           UCUAGU CGACCGUC A GU  
miRNA  3' A      A        G A    
 
 
target: AT3G16857.2 
length: 2669 
miRNA : ath-miR167b
length: 21 
 
mfe: -26.7 kcal/mol 
p-value: 0.027696 
 
position  322 
target 5' C               G C  G 
           GGAUCG GCUGGUGG U CA  
           UCUAGU CGACCGUC A GU  
miRNA  3' A      A        G A    
 
 
target: AT3G16857.2 
length: 2669 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.066191 
 
position  953 
target 5' G    A          A    A 
           GAGA GAGCAAGGAG UGAU  
           CUUU CUUGUUCUUU ACUA  
miRNA  3' A    G          G      
 
 
target: AT3G16857.2 
length: 2669 
miRNA : ath-miR847
length: 21 
 
mfe: -30.9 kcal/mol 
p-value: 0.008074 
 
position  748 
target 5' A              A     A 
           GUUAGGAAGAGGAG AGUGA  
           UAGUUCUUCUUCUC UCACU  
miRNA  3' G              C       
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G16857AT1G04240PositivetransciptN/Amolecular19039136
AT3G16857AT1G10470PositiveotherN/Amutance18262459
AT3G16857AT1G19050PositiveotherN/Amutance18262459
AT3G16857AT1G59940PositiveotherN/Amutance18262459
AT3G16857AT1G74890PositiveotherN/Amutance18262459
AT3G16857AT1G75820negativetransciptN/Amolecular18262459
AT3G16857AT2G40670PositiveotherN/Amutance18262459
AT3G16857AT2G41310PositiveotherN/Amutance18262459
AT3G16857AT3G16857Positivemodification PAT1G03430mutance11828030
AT3G16857AT3G16857Positivemodification PAT3G16360mutance11828030
AT3G16857AT3G16857Positivemodification PAT3G21510mutance11828030
AT3G16857AT3G16857Positivemodification PAT3G29350mutance11828030
AT3G16857AT3G16857Positivemodification PAT5G39340mutance11828030
AT3G16857AT3G16857PositiveotherN/Amutance18262459
AT3G16857AT3G16857negativeotherN/Amutance18262459
AT3G16857AT3G23240negativeotherN/Amolecular15282545
AT3G16857AT3G48100PositiveotherN/Amutance18262459
AT3G16857AT3G51770negativeotherN/Amolecular18980656
AT3G16857AT3G56380PositiveotherN/Amutance18262459
AT3G16857AT3G57040PositiveotherN/Amutance18262459
AT3G16857AT4G21150PositiveotherN/Amutance18262459
AT3G16857AT4G38630PositiveotherN/Amutance18262459
AT3G16857AT5G10720PositivetransciptN/Amolecular17202180
AT3G16857AT5G62920PositiveotherN/Amutance18262459

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25301
AccessionTaxon
NP_001049427Oryza sativa Japonica Group
NP_193346Arabidopsis thaliana
NP_566561Arabidopsis thaliana
NP_850600 ( AT3G16857 )Arabidopsis thaliana
113139Chlamydomonas reinhardtii
estExt_fgenesh1_pg.C_Chr_16.00010090Ostreococcus tauri
e_gw1.10.288.1Physcomitrella patens subsp. patens
e_gw1.16.93.1Physcomitrella patens subsp. patens
e_gw1.362.4.1Physcomitrella patens subsp. patens
29889.m003245Ricinus communis
27647.m000179Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF03639204669IPR017053Response regulator, plant B-type
PIRPIRSF03639204687IPR017053Response regulator, plant B-type
SuperFamilySSF521721.2e-3634182IPR011006CheY-like
SuperFamilySSF521721.2e-3634182IPR011006CheY-like
SMARTSM004487.4e-3137149IPR001789Signal transduction response regulator, receiver domain
SMARTSM004487.4e-3137149IPR001789Signal transduction response regulator, receiver domain
PROSITEPS5011031.59238153IPR001789Signal transduction response regulator, receiver domain
PROSITEPS5011031.59238153IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.6e-2139147IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.7e-2139147IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:1.10.10.601.9e-23233296IPR012287Homeodomain-related
SuperFamilySSF466892.5e-20233296IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9e-23233296IPR012287Homeodomain-related
SuperFamilySSF466892.5e-20233296IPR009057Homeodomain-like
PROSITEPS5129411.540234293IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PROSITEPS5129411.540234293IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015573e-30237292IPR006447Myb-like DNA-binding domain, SHAQKYF class
TIGRFAMTIGR015573e-30237292IPR006447Myb-like DNA-binding domain, SHAQKYF class
PfamPF002493.8e-11239289IPR014778Myb, DNA-binding
PfamPF002493.9e-11239289IPR014778Myb, DNA-binding