You are querying gene by "AT3G16470".

Locus: AT3G16470 Alias: JR1

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - response to jasmonic acid stimulus

Basic gene information ( show / hide contents )

Locus AT3G16470 | Chromosome: 3 | Strand: -
Description response to jasmonic acid stimulus
JR1( alias )
Gene model
AT3G16470.1 | From: 5595944 | To: 5598050
AT3G16470.2 | From: 5595902 | To: 5598033
AT3G16470.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G16470.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
response to wounding PMID: 9648747
response to cold PMID: 14617066
response to jasmonic acid stimulus PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT3G16470.1 
length: 1579 
miRNA : ath-miR414
length: 21 
mfe: -24.4 kcal/mol 
p-value: 0.010511 
position  551 
target 5' A      C            U 
miRNA  3' A      C            U 
target: AT3G16470.2 
length: 1626 
miRNA : ath-miR414
length: 21 
mfe: -24.4 kcal/mol 
p-value: 0.010858 
position  556 
target 5' A      C            U 
miRNA  3' A      C            U 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14136
NP_001030710Arabidopsis thaliana
NP_001030711Arabidopsis thaliana
NP_001030712 ( AT3G16470 )Arabidopsis thaliana
NP_001078021Arabidopsis thaliana
NP_001154390Arabidopsis thaliana
NP_001154564Arabidopsis thaliana
NP_175612Arabidopsis thaliana
NP_175615Arabidopsis thaliana
NP_175616Arabidopsis thaliana
NP_175617Arabidopsis thaliana
NP_175618Arabidopsis thaliana
NP_175619Arabidopsis thaliana
NP_175622Arabidopsis thaliana
NP_175623Arabidopsis thaliana
NP_175624Arabidopsis thaliana
NP_175625Arabidopsis thaliana
NP_176070Arabidopsis thaliana
NP_176218Arabidopsis thaliana
NP_176219Arabidopsis thaliana
NP_176220Arabidopsis thaliana
NP_176318Arabidopsis thaliana
NP_180168Arabidopsis thaliana
NP_181463Arabidopsis thaliana
NP_181465Arabidopsis thaliana
NP_188263Arabidopsis thaliana
NP_188264Arabidopsis thaliana
NP_188265Arabidopsis thaliana
NP_188266Arabidopsis thaliana
NP_188267Arabidopsis thaliana
NP_188775Arabidopsis thaliana
NP_198204Arabidopsis thaliana
NP_198443Arabidopsis thaliana
NP_198444Arabidopsis thaliana
NP_198670Arabidopsis thaliana
NP_198671Arabidopsis thaliana
NP_199796Arabidopsis thaliana
NP_199797Arabidopsis thaliana
NP_199798Arabidopsis thaliana
NP_564427Arabidopsis thaliana
NP_566547Arabidopsis thaliana
NP_849794Arabidopsis thaliana
NP_850594Arabidopsis thaliana
NP_850595Arabidopsis thaliana
NP_850596Arabidopsis thaliana
NP_974324Arabidopsis thaliana
NP_176112Arabidopsis thaliana
NP_199412Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF511014.1E-371143IPR001229Mannose-binding lectin
Gene3DG3DSA: lectin
PfamPF014191.9000000000000044E-3713142IPR001229Mannose-binding lectin
Gene3DG3DSA: lectin
SuperFamilySSF511017.5E-38150297IPR001229Mannose-binding lectin
PfamPF014192.1000000000000034E-37167296IPR001229Mannose-binding lectin
Gene3DG3DSA: lectin
SuperFamilySSF511012.0E-45300448IPR001229Mannose-binding lectin
PfamPF014195.100000000000043E-41318448IPR001229Mannose-binding lectin