You are querying gene by "AT3G16420".

Locus: AT3G16420 Alias: JAL30

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G16420 | Chromosome: 3 | Strand: +
Description The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.
Alias
JAL30( alias )
PBP1( alias )
Gene model
AT3G16420.1 | From: 5579392 | To: 5580959
AT3G16420.2 | From: 5579481 | To: 5580959
AT3G16420.3 | From: 5579392 | To: 5580891
Sequence
AT3G16420.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G16420.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G16420.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
cellular_component
cytosol PMID: 15919674
biological_process
protein folding PMID: 15919674
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G16420.1 
length: 1274 
miRNA : ath-miR778
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.003559 
 
position  625 
target 5' A        U           C 
           GGUGUACG UGGAC AAGCC  
           CCACAUGU AUUUG UUCGG  
miRNA  3' G              G     U 
 
 
target: AT3G16420.2 
length: 1261 
miRNA : ath-miR778
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.003510 
 
position  612 
target 5' A        U           C 
           GGUGUACG UGGAC AAGCC  
           CCACAUGU AUUUG UUCGG  
miRNA  3' G              G     U 
 
 
target: AT3G16420.3 
length: 1187 
miRNA : ath-miR778
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.003231 
 
position  625 
target 5' A        U           C 
           GGUGUACG UGGAC AAGCC  
           CCACAUGU AUUUG UUCGG  
miRNA  3' G              G     U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14136
AccessionTaxon
NP_001030710 ( AT3G16420 )Arabidopsis thaliana
NP_001030711Arabidopsis thaliana
NP_001030712Arabidopsis thaliana
NP_001078021Arabidopsis thaliana
NP_001154390Arabidopsis thaliana
NP_001154564Arabidopsis thaliana
NP_175612Arabidopsis thaliana
NP_175615Arabidopsis thaliana
NP_175616Arabidopsis thaliana
NP_175617Arabidopsis thaliana
NP_175618Arabidopsis thaliana
NP_175619Arabidopsis thaliana
NP_175622Arabidopsis thaliana
NP_175623Arabidopsis thaliana
NP_175624Arabidopsis thaliana
NP_175625Arabidopsis thaliana
NP_176070Arabidopsis thaliana
NP_176218Arabidopsis thaliana
NP_176219Arabidopsis thaliana
NP_176220Arabidopsis thaliana
NP_176318Arabidopsis thaliana
NP_180168Arabidopsis thaliana
NP_181463Arabidopsis thaliana
NP_181465Arabidopsis thaliana
NP_188263Arabidopsis thaliana
NP_188264Arabidopsis thaliana
NP_188265Arabidopsis thaliana
NP_188266Arabidopsis thaliana
NP_188267Arabidopsis thaliana
NP_188775Arabidopsis thaliana
NP_198204Arabidopsis thaliana
NP_198443Arabidopsis thaliana
NP_198444Arabidopsis thaliana
NP_198670Arabidopsis thaliana
NP_198671Arabidopsis thaliana
NP_199796Arabidopsis thaliana
NP_199797Arabidopsis thaliana
NP_199798Arabidopsis thaliana
NP_564427Arabidopsis thaliana
NP_566547Arabidopsis thaliana
NP_849794Arabidopsis thaliana
NP_850594Arabidopsis thaliana
NP_850595Arabidopsis thaliana
NP_850596Arabidopsis thaliana
NP_974324Arabidopsis thaliana
NP_176112Arabidopsis thaliana
NP_199412Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF511012.9E-431142IPR001229Mannose-binding lectin
Gene3DG3DSA:2.100.10.301.600002406959863E-352142IPR001229Mannose-binding lectin
PfamPF014191.9999999999999946E-4014142IPR001229Mannose-binding lectin
Gene3DG3DSA:2.100.10.303.700010635372355E-43146295IPR001229Mannose-binding lectin
SuperFamilySSF511014.2E-48146295IPR001229Mannose-binding lectin
PfamPF014196.8000000000000575E-46163295IPR001229Mannose-binding lectin