You are querying gene by "AT3G15730".

Locus: AT3G15730 Alias: PLD

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - positive regulation of abscisic acid mediated signaling 16614222
jasmonic acidMutant Hormone biosynthesis Encodes phospholipase D alpha 1. Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. 11090221

Basic gene information ( show / hide contents )

Locus AT3G15730 | Chromosome: 3 | Strand: +
Description Encodes phospholipase D alpha 1. Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.
Alias
PLD( alias )
PLDALPHA1( alias )
Gene model
AT3G15730.1 | From: 5330329 | To: 5333752
Sequence
AT3G15730.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
phospholipase D activity PMID: 9353280
cellular_component
membrane PMID: 10198096
nucleus PMID: 10198096
clathrin-coated vesicle PMID: 10198096
mitochondrion PMID: 10198096
plasma membrane PMID: 10198096
biological_process
positive regulation of abscisic acid mediated signaling PMID: 16614222
fatty acid metabolic process PMID: 11239826
seed germination PMID: 17565616
regulation of stomatal movement PMID: 16614222
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Glycerophospholipid metabolism phospholipase D
Ether lipid metabolism phospholipase D
GnRH signaling pathway phospholipase D
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   jasmonic acid   ]

Genotype PMID Type
anti-PLD 11090221 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G15730.1 
length: 2810 
miRNA : ath-miR1886.3
length: 21 
 
mfe: -21.7 kcal/mol 
p-value: 0.025730 
 
position  476 
target 5' C      U         G   A 
           AGUGGG UGAGAUCUU GAU  
           UCAUUC ACUUUAGAA UUA  
miRNA  3'        U         A   A 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G15730AT5G58670Positivemodification OtherN/Abiochem11595796
AT3G15730AT5G58670Positivemodification PN/AGO/othersN/A
AT3G15730PAPositivemodification PN/AGO/others16614222

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14362
AccessionTaxon
NP_175666Arabidopsis thaliana
NP_188194 ( AT3G15730 )Arabidopsis thaliana
NP_192920Arabidopsis thaliana
NP_192921Arabidopsis thaliana
NP_192922Arabidopsis thaliana
NP_197919Arabidopsis thaliana
NP_565963Arabidopsis thaliana
NP_567160Arabidopsis thaliana
NP_567989Arabidopsis thaliana
NP_849501Arabidopsis thaliana
NP_849539Arabidopsis thaliana
NP_001042153Oryza sativa Japonica Group
NP_001048777Oryza sativa Japonica Group
NP_001051849Oryza sativa Japonica Group
NP_001054773Oryza sativa Japonica Group
NP_001058015Oryza sativa Japonica Group
NP_001058016Oryza sativa Japonica Group
NP_001058017Oryza sativa Japonica Group
NP_001059324Oryza sativa Japonica Group
NP_001063203Oryza sativa Japonica Group
NP_001063826Oryza sativa Japonica Group
NP_001065108Oryza sativa Japonica Group
e_gw1.19.181.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_80143Physcomitrella patens subsp. patens
estExt_Genewise1.C_940006Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_580068Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_100017Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_360039Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_20288Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3240023Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_165000063Physcomitrella patens subsp. patens
28320.m001141Ricinus communis
28725.m000311Ricinus communis
29784.m000369Ricinus communis
29841.m002847Ricinus communis
29848.m004631Ricinus communis
30170.m014290Ricinus communis
30174.m008942Ricinus communis
30190.m011102Ricinus communis
NP_175914Arabidopsis thaliana
28694.m000682Ricinus communis
NP_849502Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF03647001810IPR011402Phospholipase D, plant
SuperFamilySSF495625e-223153IPR008973C2 calcium/lipid-binding domain, CaLB
SMARTSM002396.6e-139125IPR000008C2 calcium-dependent membrane targeting
PfamPF001685e-1214109IPR000008C2 calcium-dependent membrane targeting
PANTHERPTHR18896028809IPR015679Phospholipase D
PfamPF006142.9e-12327366IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001550.00016327366IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS5003511.184327366IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001551.1e-08656683IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS5003515.418656683IPR001736Phospholipase D/Transphosphatidylase
PfamPF006144e-08657683IPR001736Phospholipase D/Transphosphatidylase