You are querying gene by "AT3G13920".

Locus: AT3G13920 Alias: EIF4A1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G13920 | Chromosome: 3 | Strand: -
Description eukaryotic translation initiation factor 4A-1
Alias
EIF4A1( alias )
RH4( alias )
TIF4A1( alias )
Gene model
AT3G13920.1 | From: 4592263 | To: 4594969
AT3G13920.2 | From: 4592263 | To: 4594969
AT3G13920.3 | From: 4592312 | To: 4594926
Sequence
AT3G13920.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G13920.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G13920.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
translation initiation factor activity PMID:
ATP-dependent helicase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
translational initiation PMID: 1398145
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10414
AccessionTaxon
NP_001030693Arabidopsis thaliana
NP_001078148Arabidopsis thaliana
NP_175829Arabidopsis thaliana
NP_177417Arabidopsis thaliana
NP_566469 ( AT3G13920 )Arabidopsis thaliana
NP_001045878Oryza sativa Japonica Group
NP_001058481Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_07.00010433Ostreococcus tauri
e_gw1.31.242.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_3830001Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_1360003Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_770006Physcomitrella patens subsp. patens
29706.m001331Ricinus communis
29863.m001062Ricinus communis
29912.m005374Ricinus communis
NP_001067252Oryza sativa Japonica Group
188942Chlamydomonas reinhardtii
NP_175549Arabidopsis thaliana
NP_188870Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS511950.02957IPR014014RNA helicase, DEAD-box type, Q motif
PROSITEPS511950.03967IPR014014RNA helicase, DEAD-box type, Q motif
PROSITEPS5119510.4333967IPR014014RNA helicase, DEAD-box type, Q motif
SMARTSM004871.3000049540733013E-5648245IPR014001DEAD-like helicase, N-terminal
PfamPF002701.9999999999999944E-4154215IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
SMARTSM004871.3000049540733013E-5658255IPR014001DEAD-like helicase, N-terminal
SMARTSM004871.5e-5658255IPR014001DEAD-like helicase, N-terminal
PROSITEPS511920.060230IPR014021Helicase, superfamily 1/2, ATP-binding domain
PfamPF002702.1000000000000034E-4164225IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PfamPF002702.6e-4464225IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PROSITEPS511920.070240IPR014021Helicase, superfamily 1/2, ATP-binding domain
PROSITEPS5119229.42270240IPR014021Helicase, superfamily 1/2, ATP-binding domain
PROSITEPS000390.0176184IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site
PROSITEPS000390.0186194IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site
PROSITEPS00039NA186194IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site
PROSITEPS511940.0241402IPR001650DNA/RNA helicase, C-terminal
PROSITEPS511940.0251415IPR001650DNA/RNA helicase, C-terminal
PROSITEPS5119425.831251412IPR001650DNA/RNA helicase, C-terminal
SMARTSM004902.499998119564648E-31282363IPR001650DNA/RNA helicase, C-terminal
PfamPF002711.0E-22288363IPR001650DNA/RNA helicase, C-terminal
SMARTSM004902.499998119564648E-31292373IPR001650DNA/RNA helicase, C-terminal
SMARTSM004902.9e-31292373IPR001650DNA/RNA helicase, C-terminal
PfamPF002711.0999999999999998E-22298373IPR001650DNA/RNA helicase, C-terminal
PfamPF002711.3e-25298373IPR001650DNA/RNA helicase, C-terminal