You are querying gene by "AT3G13380".

Locus: AT3G13380 Alias: BRL3

Hormone Evidence Function category Gene Description PMID
brassinosteroidMutant Hormone receptor BRI1 homolog genes 15486337

Basic gene information ( show / hide contents )

Locus AT3G13380 | Chromosome: 3 | Strand: +
Description BRI1 homolog genes
Alias
BRL3( alias )
Gene model
AT3G13380.1 | From: 4346564 | To: 4350930
Sequence
AT3G13380.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
protein kinase activity PMID:
cellular_component
endomembrane system PMID:
biological_process
protein amino acid phosphorylation PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   brassinosteroid   ]

Genotype PMID Type
brl3-1 15486337 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G13380.1 
length: 4274 
miRNA : ath-miR399e
length: 21 
 
mfe: -26.4 kcal/mol 
p-value: 0.038665 
 
position  1426 
target 5' U       C     C      C 
           GAGGCAG UCUCU UUG CA  
           CUCCGUU AGAGG AAC GU  
miRNA  3' G       U     A   C    
 
 
target: AT3G13380.1 
length: 4274 
miRNA : ath-miR779.2
length: 21 
 
mfe: -22.1 kcal/mol 
p-value: 0.079253 
 
position  1307 
target 5' C                     G 
           GG CGAC AGAUUUCCGGUUA  
           UC GUUG UUUAAAGGUUAGU  
miRNA  3'    A    C               
 
 
target: AT3G13380.1 
length: 4274 
miRNA : ath-miR780.1
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.052498 
 
position  3040 
target 5' C     G        A      A 
           AUCUG U AGCAGC GCUGGA  
           UGGAC A UUGUCG CGAUCU  
miRNA  3'       G G      A        
 
 
target: AT3G13380.1 
length: 4274 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -22.1 kcal/mol 
p-value: 0.167081 
 
position  3235 
target 5' U  U     U            U 
           UG AGCGA CAAGAAGUUGAU  
           AC UUGCU GUUCUUUGACUA  
miRNA  3'    U     U              
 
 
target: AT3G13380.1 
length: 4274 
miRNA : ath-miR858
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.062087 
 
position  2358 
target 5' G     G        U  A    U 
           AAGGU GGACGGAU GC GAGG  
           UUCCA CUUGUCUG UG CUUU  
miRNA  3'       G        U         
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G13380AT1G18400PositiveotherN/Amutance12454087
AT3G13380AT1G73830PositiveotherN/Amutance12454087
AT3G13380AT4G36540PositiveotherN/Amutance12454087
AT3G13380AT5G58220PositiveotherN/Amutance14977918

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10345
AccessionTaxon
NP_173166Arabidopsis thaliana
NP_174809Arabidopsis thaliana
NP_192625Arabidopsis thaliana
NP_201198Arabidopsis thaliana
NP_849538Arabidopsis thaliana
120925Chlamydomonas reinhardtii
NP_001054768Oryza sativa Japonica Group
NP_001059710Oryza sativa Japonica Group
27956.m000355Ricinus communis
29637.m000755Ricinus communis
29666.m001469Ricinus communis
29680.m001748Ricinus communis
29904.m003011Ricinus communis
29908.m006021Ricinus communis
30147.m014235Ricinus communis
30147.m014283Ricinus communis
NP_001047110Oryza sativa Japonica Group
NP_001058906Oryza sativa Japonica Group
NP_001064062Oryza sativa Japonica Group
NP_001064813Oryza sativa Japonica Group
NP_001064816Oryza sativa Japonica Group
NP_001064819Oryza sativa Japonica Group
NP_001065120Oryza sativa Japonica Group
e_gw1.11.00.101.1Ostreococcus tauri
NP_172335Arabidopsis thaliana
NP_174166Arabidopsis thaliana
NP_177710Arabidopsis thaliana
NP_190536Arabidopsis thaliana
NP_193760Arabidopsis thaliana
NP_194594Arabidopsis thaliana
NP_200956Arabidopsis thaliana
NP_201371Arabidopsis thaliana
NP_001032080Arabidopsis thaliana
NP_174673Arabidopsis thaliana
NP_177451Arabidopsis thaliana
NP_180875Arabidopsis thaliana
NP_189066Arabidopsis thaliana
NP_199705Arabidopsis thaliana
NP_200415Arabidopsis thaliana
NP_567748Arabidopsis thaliana
e_gw1.172.6.1Physcomitrella patens subsp. patens
e_gw1.244.2.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1110048Physcomitrella patens subsp. patens
estExt_Genewise1.C_680049Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_480110Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_63000078Physcomitrella patens subsp. patens
27837.m000161Ricinus communis
27893.m000225Ricinus communis
27985.m000860Ricinus communis
28644.m000896Ricinus communis
28830.m000234Ricinus communis
29904.m002997Ricinus communis
30147.m013904Ricinus communis
30204.m001801Ricinus communis
NP_173217Arabidopsis thaliana
NP_193747Arabidopsis thaliana
NP_196345Arabidopsis thaliana
NP_199283Arabidopsis thaliana
30147.m013919Ricinus communis
29680.m001721Ricinus communis
29765.m000745Ricinus communis
NP_001042139Oryza sativa Japonica Group
NP_001042546Oryza sativa Japonica Group
NP_001045656Oryza sativa Japonica Group
NP_001048946Oryza sativa Japonica Group
NP_001049453Oryza sativa Japonica Group
NP_001051418Oryza sativa Japonica Group
NP_001052097Oryza sativa Japonica Group
NP_001054764Oryza sativa Japonica Group
NP_001056517Oryza sativa Japonica Group
NP_001057964Oryza sativa Japonica Group
NP_001058593Oryza sativa Japonica Group
NP_001058840Oryza sativa Japonica Group
NP_001061677Oryza sativa Japonica Group
NP_001061926Oryza sativa Japonica Group
NP_001062124Oryza sativa Japonica Group
NP_001062883Oryza sativa Japonica Group
NP_001067562Oryza sativa Japonica Group
e_gw1.14.30.1Physcomitrella patens subsp. patens
e_gw1.14.67.1Physcomitrella patens subsp. patens
e_gw1.161.14.1Physcomitrella patens subsp. patens
e_gw1.182.5.1Physcomitrella patens subsp. patens
e_gw1.281.94.1Physcomitrella patens subsp. patens
e_gw1.5.384.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1780069Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2120003Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_247000007Physcomitrella patens subsp. patens
gw1.102.8.1Physcomitrella patens subsp. patens
29794.m003413Ricinus communis
29983.m003126Ricinus communis
30170.m014376Ricinus communis
30190.m011299Ricinus communis
51128.m000015Ricinus communis
NP_001117501Arabidopsis thaliana
NP_175957Arabidopsis thaliana
NP_178304Arabidopsis thaliana
NP_187946 ( AT3G13380 )Arabidopsis thaliana
NP_195650Arabidopsis thaliana
NP_001044077Oryza sativa Japonica Group
NP_001062792Oryza sativa Japonica Group
NP_001064047Oryza sativa Japonica Group
28966.m000525Ricinus communis
29592.m000104Ricinus communis
29780.m001387Ricinus communis
NP_001117591Arabidopsis thaliana
30158.m000501Ricinus communis
NP_001044213Oryza sativa Japonica Group
NP_001044979Oryza sativa Japonica Group
NP_001046354Oryza sativa Japonica Group
NP_001046355Oryza sativa Japonica Group
NP_001057858Oryza sativa Japonica Group
NP_001067347Oryza sativa Japonica Group
NP_001067348Oryza sativa Japonica Group
NP_001067561Oryza sativa Japonica Group
28830.m000232Ricinus communis
29737.m001253Ricinus communis
29912.m005436Ricinus communis
30074.m001369Ricinus communis
30099.m001625Ricinus communis
30147.m014245Ricinus communis
30170.m013627Ricinus communis
30170.m013628Ricinus communis
30170.m013629Ricinus communis
NP_172468Arabidopsis thaliana
NP_188604Arabidopsis thaliana
NP_194578Arabidopsis thaliana
NP_199777Arabidopsis thaliana
NP_850942Arabidopsis thaliana
NP_001045202Oryza sativa Japonica Group
NP_177363Arabidopsis thaliana
NP_197965Arabidopsis thaliana
NP_201372Arabidopsis thaliana
NP_001057860Oryza sativa Japonica Group
NP_199948Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF082632.3000000000000006E-43373IPR013210Leucine-rich repeat-containing N-terminal domain, type 2
PfamPF00560599.9999999999997125146IPR001611Leucine-rich repeat
PfamPF0056074.0202220IPR001611Leucine-rich repeat
PfamPF005604.9304325IPR001611Leucine-rich repeat
PfamPF0056014.0376398IPR001611Leucine-rich repeat
PfamPF00560870.0000000000003476498IPR001611Leucine-rich repeat
PfamPF00560540.0000000000001548567IPR001611Leucine-rich repeat
PfamPF0056027.000000000000007665686IPR001611Leucine-rich repeat
SuperFamilySSF561122.1E-778431152IPR011009Protein kinase-like domain
PROSITEPS500110.08581136IPR000719Protein kinase, catalytic domain
PfamPF000695.100000000000043E-418611130IPR017442Serine/threonine-protein kinase-like domain
PROSITEPS001070.0864887IPR017441Protein kinase, ATP binding site
PROSITEPS001080.0981993IPR008271Serine/threonine-protein kinase, active site