You are querying gene by "AT3G11980".

Locus: AT3G11980 Alias: MS2

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G11980 | Chromosome: 3 | Strand: +
Description Similar to fatty acid reductases.
Alias
MS2( alias )
Gene model
AT3G11980.1 | From: 3814242 | To: 3817123
Sequence
AT3G11980.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor PMID: 9351246
cellular_component
chloroplast PMID:
biological_process
microsporogenesis PMID: 9351246
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G11980.1 
length: 2112 
miRNA : ath-miR414
length: 21 
 
mfe: -27.2 kcal/mol 
p-value: 0.003955 
 
position  206 
target 5' A              U     G 
           GGUGGUGGUGGUGA GGUGG  
           CUGCUACUACUACU CUACU  
miRNA  3' A              U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11079
AccessionTaxon
e_gw1.31.229.1Physcomitrella patens subsp. patens
gw1.136.27.1Physcomitrella patens subsp. patens
NP_187805 ( AT3G11980 )Arabidopsis thaliana
NP_001049083Oryza sativa Japonica Group
NP_567936Arabidopsis thaliana
29791.m000527Ricinus communis
30055.m001531Ricinus communis
NP_001052538Oryza sativa Japonica Group
NP_001052540Oryza sativa Japonica Group
NP_190041Arabidopsis thaliana
NP_190042Arabidopsis thaliana
NP_197642Arabidopsis thaliana
NP_001030809Arabidopsis thaliana
NP_190040Arabidopsis thaliana
41482.m000013Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.40.50.7205.29999657550191E-10127444IPR016040NAD(P)-binding domain
PfamPF079937.799999999999993E-78135438IPR013120Male sterility, NAD-binding
PfamPF030155.500000000000002E-13545613IPR004262Male sterility