You are querying gene by "AT3G08550".

Locus: AT3G08550 Alias: ABI8

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction ABI8 encodes a protein with no domains of known function but belongs to a small plant-specific protein family. 14742875
GeneOntology - response to abscisic acid stimulus 14742875

Basic gene information ( show / hide contents )

Locus AT3G08550 | Chromosome: 3 | Strand: +
Description ABI8 encodes a protein with no domains of known function but belongs to a small plant-specific protein family.
Alias
ABI8( alias )
ELD1( alias )
KOB1( alias )
Gene model
AT3G08550.1 | From: 2596434 | To: 2599825
Sequence
AT3G08550.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
chloroplast thylakoid lumen PMID: 11719511
plasma membrane PMID: 12215501
cytoplasm PMID: 14742875
biological_process
unidimensional cell growth PMID: 10859181
plant-type cell wall modification during multidimensional cell growth PMID: 12215501
cellulose biosynthetic process PMID: 12215501
response to glucose stimulus PMID: 14742875
response to abscisic acid stimulus PMID: 14742875
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
abi8 14742875 mutant
abi8abh1 14742875 mutant
ein2-1abi8 14742875 mutant
ein3-1abi8 14742875 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G08550.1 
length: 2013 
miRNA : ath-miR780.2
length: 21 
 
mfe: -24.2 kcal/mol 
p-value: 0.026027 
 
position  986 
target 5' G              A      U 
           GUGUCA AUGUUCA GAAGAA  
           UACGGU UAUAAGU CUUCUU  
miRNA  3'        C       G        
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G08550ABRESPositivetransciptN/AGO/othersN/A
AT3G08550AT1G20440PositivetransciptN/AGO/othersN/A
AT3G08550AT2G38050PositivetransciptN/AGO/othersN/A
AT3G08550AT3G23050PositivetransciptN/AGO/othersN/A
AT3G08550AT3G63210PositivetransciptN/AGO/othersN/A

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30338
AccessionTaxon
NP_001118499Arabidopsis thaliana
NP_187467 ( AT3G08550 )Arabidopsis thaliana
NP_191279Arabidopsis thaliana
170898Chlamydomonas reinhardtii
NP_001042507Oryza sativa Japonica Group
0100010003Ostreococcus tauri
e_gw1.143.69.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1420105Physcomitrella patens subsp. patens
28470.m00445Ricinus communis
30131.m007251Ricinus communis

No related Cross Link information for this gene.