You are querying gene by "AT3G05120".

Locus: AT3G05120 Alias: ATGID1A

Hormone Evidence Function category Gene Description PMID
gibberellinMutant Hormone receptor Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). 16709201
GeneOntology - positive regulation of gibberellic acid mediated signaling 17194763

Basic gene information ( show / hide contents )

Locus AT3G05120 | Chromosome: 3 | Strand: +
Description Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1).
Alias
ATGID1A( alias )
GID1A( alias )
Gene model
AT3G05120.1 | From: 1430477 | To: 1432784
Sequence
AT3G05120.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
hydrolase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
positive regulation of gibberellic acid mediated signaling PMID: 17194763
raffinose family oligosaccharide biosynthetic process PMID: 16709201
gibberellin-mediated signaling PMID: 17521411
floral organ morphogenesis PMID: 17194763
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
gid1a-1 gid1b-1 gid1c-2 1913748 mutant
gid1a-1 gid1b-1 gid1c-1 17194763 mutant
gid1a-1 gid1c-1 17194763 mutant
gid1a-1 gid1b-1 17194763 mutant
gid1a-1 17194763 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G05120.1 
length: 1740 
miRNA : ath-miR397b
length: 21 
 
mfe: -24.0 kcal/mol 
p-value: 0.029672 
 
position  649 
target 5' U                  A  A 
           UAUCGGCG UGCAC CAG GA  
           GUAGUUGC ACGUG GUU CU  
miRNA  3'          U     A   A    
 
 
target: AT3G05120.1 
length: 1740 
miRNA : ath-miR779.1
length: 21 
 
mfe: -25.2 kcal/mol 
p-value: 0.030465 
 
position  1090 
target 5' U       U       C      G 
           UG GCAG UGGCAUA GCGGAA  
           AC CGUC GUUGUAU CGUCUU  
miRNA  3' U  U                     
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G05120AT1G14920negativeprotein degradationN/Amutance12271067
AT3G05120AT1G66350negativeprotein degradationN/Amutance12183174
AT3G05120AT2G01570negativeprotein degradationN/Amutance9215910
AT3G05120AT3G03450negativeprotein degradationN/Amutance11118137
AT3G05120AT5G17490negativeprotein degradationN/Amutance11118137
AT3G05120SUB1CPositiveotherN/Amolecular18936491

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10330
AccessionTaxon
NP_197744Arabidopsis thaliana
NP_001057470Oryza sativa Japonica Group
NP_001060440Oryza sativa Japonica Group
NP_001060441Oryza sativa Japonica Group
NP_001060443Oryza sativa Japonica Group
NP_001067576Oryza sativa Japonica Group
NP_001067581Oryza sativa Japonica Group
e_gw1.37.179.1Physcomitrella patens subsp. patens
29910.m000927Ricinus communis
29910.m000966Ricinus communis
NP_001042057Oryza sativa Japonica Group
NP_001042062Oryza sativa Japonica Group
NP_001042063Oryza sativa Japonica Group
NP_001051515Oryza sativa Japonica Group
NP_001058947Oryza sativa Japonica Group
NP_001058948Oryza sativa Japonica Group
NP_001058949Oryza sativa Japonica Group
NP_001058950Oryza sativa Japonica Group
e_gw1.297.55.1Physcomitrella patens subsp. patens
NP_187163 ( AT3G05120 )Arabidopsis thaliana
NP_198084Arabidopsis thaliana
30008.m000796Ricinus communis
NP_001055520Oryza sativa Japonica Group
e_gw1.25.238.1Physcomitrella patens subsp. patens
e_gw1.33.112.1Physcomitrella patens subsp. patens
e_gw1.37.238.1Physcomitrella patens subsp. patens
e_gw1.91.190.1Physcomitrella patens subsp. patens
30128.m008695Ricinus communis
NP_196275Arabidopsis thaliana
NP_850782Arabidopsis thaliana
29333.m001098Ricinus communis
29755.m000440Ricinus communis
NP_001067580Oryza sativa Japonica Group
29983.m003304Ricinus communis
29848.m004636Ricinus communis
29929.m004742Ricinus communis
NP_001058951Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF078592.2999999999999847E-57109322IPR013094Alpha/beta hydrolase fold-3
PROSITEPS011730.0109125IPR002168Lipase, GDXG, active site
PROSITEPS011740.0185197IPR002168Lipase, GDXG, active site