You are querying gene by "AT3G04720".

Locus: AT3G04720 Alias: HEL

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 8118053

Basic gene information ( show / hide contents )

Locus AT3G04720 | Chromosome: 3 | Strand: -
Description response to ethylene stimulus
Alias
HEL( alias )
PR-4( alias )
PR4( alias )
Gene model
AT3G04720.1 | From: 1285571 | To: 1286568
Sequence
AT3G04720.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
chitin binding PMID: 8118053
cellular_component
endomembrane system PMID:
biological_process
systemic acquired resistance PMID: 17419843
response to ethylene stimulus PMID: 8118053
response to virus PMID: 8118053
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G04720.1 
length: 837 
miRNA : ath-miR776
length: 21 
 
mfe: -21.0 kcal/mol 
p-value: 0.042098 
 
position  494 
target 5' U   G   C            U 
           GCA CAA GGAGG CUUGGA  
           UGU GUU UCUUC GAAUCU  
miRNA  3' U   A   A     U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37354
AccessionTaxon
NP_187123 ( AT3G04720 )Arabidopsis thaliana
NP_001068187Oryza sativa Japonica Group
NP_001068188Oryza sativa Japonica Group
NP_001068189Oryza sativa Japonica Group
NP_001068190Oryza sativa Japonica Group
29598.m000459Ricinus communis
29598.m000457Ricinus communis
29598.m000458Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF001871.3999999999999998E-132162IPR001002Chitin-binding, type 1
PROSITEPS509410.02164IPR001002Chitin-binding, type 1
Gene3DG3DSA:3.30.60.103.2999980215446272E-122264IPR001002Chitin-binding, type 1
SuperFamilySSF570161.5E-132275IPR001002Chitin-binding, type 1
SMARTSM002701.2000011745813375E-142362IPR001002Chitin-binding, type 1
PRINTSPR004511.9000006847787028E-53139IPR001002Chitin-binding, type 1
ProDomPD0006090.03262IPR001002Chitin-binding, type 1
PROSITEPS000260.03352IPR018371Chitin-binding, type 1, conserved site
PRINTSPR004511.9000006847787028E-53946IPR001002Chitin-binding, type 1
PANTHERPTHR225950.041206IPR000726Glycoside hydrolase, family 19, catalytic
PANTHERPTHR22595:SF10.041206IPR001153Barwin
PRINTSPR004511.9000006847787028E-54653IPR001002Chitin-binding, type 1
Gene3DG3DSA:2.40.40.105.000009099153147E-6372193IPR014733Barwin-like endoglucanase
PROSITEPS511740.072193IPR001153Barwin
SuperFamilySSF506851.6E-4772193IPR009009Barwin-related endoglucanase
PfamPF009673.999999999999978E-6473191IPR001153Barwin
ProDomPD0045350.080191IPR001153Barwin
PRINTSPR006023.9999854413940614E-45107125IPR001153Barwin
PRINTSPR006023.9999854413940614E-45126144IPR001153Barwin
PROSITEPS007710.0132140IPR018226Barwin, conserved site
PRINTSPR006023.9999854413940614E-45145163IPR001153Barwin
PRINTSPR006023.9999854413940614E-45166190IPR001153Barwin
PROSITEPS007720.0184191IPR018226Barwin, conserved site