You are querying gene by "AT3G03740".

Locus: AT3G03740 Alias: ATBPM4

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT3G03740 | Chromosome: 3 | Strand: -
Description BTB-POZ and MATH domain 4 (ATBPM4); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ATBPM5 (BTB-POZ and MATH domain 5); protein binding (TAIR:AT5G21010.1); Has 4765 Blast hits to 4690 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 3585; Fungi - 73; Plants - 877; Viruses - 41; Other Eukaryotes - 189 (source: NCBI BLink).
Alias
ATBPM4( alias )
Gene model
AT3G03740.1 | From: 936885 | To: 939815
Sequence
AT3G03740.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G03740.1 
length: 1627 
miRNA : ath-miR846
length: 21 
 
mfe: -20.7 kcal/mol 
p-value: 0.052562 
 
position  387 
target 5' A      U   C           U 
           GGUUCA AGC ACUUCGAU CG  
           UUAAGU UCG UGAAGUUA GU  
miRNA  3'                     A  U 
 
 
target: AT3G03740.1 
length: 1627 
miRNA : ath-miR847
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.009794 
 
position  1179 
target 5' A      C          G  A 
           GUUAAG GGAGGAGGAG GA  
           UAGUUC UCUUCUCCUC CU  
miRNA  3' G      U          A    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_57753
AccessionTaxon
NP_566212 ( AT3G03740 )Arabidopsis thaliana
NP_001051524Oryza sativa Japonica Group
NP_001058976Oryza sativa Japonica Group
29665.m000087Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:2.60.210.101.6000006502252768E-643187IPR013322TRAF-type
SuperFamilySSF495994.6E-3843182IPR008974TRAF-like
PROSITEPS501440.046180IPR002083MATH
SMARTSM000611.8000014928719634E-951163IPR002083MATH
PfamPF009170.002467180IPR002083MATH
Gene3DG3DSA:3.30.710.104.400009336439319E-19187324IPR011333BTB/POZ fold
SuperFamilySSF546956.9E-27188328IPR011333BTB/POZ fold
PfamPF006516.500000000000007E-19209327IPR013069BTB/POZ
SMARTSM002254.199997713395805E-22216328IPR000210BTB/POZ-like
PROSITEPS500970.0216282IPR000210BTB/POZ-like
PANTHERPTHR232301.3999927719513818E-77226382IPR013089Kelch related