You are querying gene by "AT3G03540".

Locus: AT3G03540 Alias: NPC3

Hormone Evidence Function category Gene Description PMID
BrassinosteroidMutant Hormone signal transduction Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions. 20507939

Basic gene information ( show / hide contents )

Locus AT3G03540 | Chromosome: 3 | Strand: -
Description Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.
Alias
NPC3( alias )
NPC5( alias )
Gene model
AT3G03540.1 | From: 846357 | To: 848304
Sequence
AT3G03540.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
hydrolase activity, acting on ester bonds PMID:
cellular_component
cellular_component_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   Brassinosteroid   ]

Genotype PMID Type
npc3-1 20507939 mutant
npc3-2 20507939 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G03540.1 
length: 1566 
miRNA : ath-miR781
length: 21 
 
mfe: -21.6 kcal/mol 
p-value: 0.135448 
 
position  1415 
target 5' A     U G       G     A 
           UAAGU U UAGAAGA UCUAA  
           AUUCA A GUCUUUU AGAUU  
miRNA  3'       U G       G       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14126
AccessionTaxon
NP_172203Arabidopsis thaliana
NP_180255Arabidopsis thaliana
NP_001051927Oryza sativa Japonica Group
NP_001068198Oryza sativa Japonica Group
e_gw1.223.24.1Physcomitrella patens subsp. patens
30148.m001447Ricinus communis
NP_001041746Oryza sativa Japonica Group
e_gw1.227.124.1Physcomitrella patens subsp. patens
NP_001045435Oryza sativa Japonica Group
NP_001051765Oryza sativa Japonica Group
29681.m001334Ricinus communis
30142.m000628Ricinus communis
NP_187002Arabidopsis thaliana
NP_566206Arabidopsis thaliana
NP_566207 ( AT3G03540 )Arabidopsis thaliana
NP_190430Arabidopsis thaliana
30147.m014488Ricinus communis
e_gw1.282.8.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_930075Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_450163Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF041856.700000000000055E-10913380IPR007312Phosphoesterase