You are querying gene by "AT3G03450".

Locus: AT3G03450 Alias: RGL2

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16400150
abscisic acidGeneOntology - response to abscisic acid stimulus 16400150
gibberellinMutant Hormone signal transduction transcription factor (SCRAEROW-like) 11118137
GeneOntology - response to gibberellin stimulus 17333251

Basic gene information ( show / hide contents )

Locus AT3G03450 | Chromosome: 3 | Strand: -
Description transcription factor (SCRAEROW-like)
Alias
RGL2( alias )
Gene model
AT3G03450.1 | From: 819344 | To: 821413
Sequence
AT3G03450.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11877383
cellular_component
nucleus PMID: 11877383
biological_process
negative regulation of gibberellic acid mediated signaling PMID: 16167898
seed germination PMID: 17141619
response to gibberellin stimulus PMID: 17333251
hyperosmotic salinity response PMID: 16400150
response to ethylene stimulus PMID: 16400150
response to abscisic acid stimulus PMID: 16400150
negative regulation of seed germination PMID: 11877383
response to salt stress PMID: 16400150
seed dormancy PMID: 17141619
gibberellic acid mediated signaling PMID: 11877383
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
ga1-3 rga-t2 gai-t6 rgl2-1 14973286 mutant
ga1-3 rga-t2 gai-t6 rgl2-1 rgl1-1 14973286 17220364 mutant
ga1-3 rgl2-1 16034591 mutant
rgl1-1 rgl2-1 gai-t6 rga-t2 17220364 16400150 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G03450.1 
length: 2070 
miRNA : ath-miR776
length: 21 
 
mfe: -23.4 kcal/mol 
p-value: 0.031687 
 
position  1573 
target 5' U                C   U 
           GCA CAGUGGAGGAUU GGA  
           UGU GUUAUCUUCUGA UCU  
miRNA  3' U   A            A     
 
 
target: AT3G03450.1 
length: 2070 
miRNA : ath-miR845a
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.015659 
 
position  1261 
target 5' G       C      U     C 
           GUUAAUU GGUAUU GAGCU  
           UAGUUAA CCAUAG CUCGG  
miRNA  3' G              U     C 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G03450AT1G08780PositiveotherN/Amolecular10787063
AT3G03450AT1G08780PositiveotherN/Amolecular16916886
AT3G03450AT1G73730negativeotherN/Amolecular17616507
AT3G03450AT2G04240PositiveotherN/Amutance17933900
AT3G03450AT2G14610negativeotherN/Amolecular18450451
AT3G03450AT2G27050negativeotherN/Amolecular17616507
AT3G03450AT2G43010PositiveotherN/Amolecular19249207
AT3G03450AT3G01530negativeotherN/Amolecular19325888
AT3G03450AT3G11540Positiveprotein degradationN/Amutance11118137
AT3G03450AT3G20770negativeotherN/Amolecular17616507
AT3G03450AT3G27810negativeotherN/Amolecular19325888
AT3G03450AT3G57260negativeotherN/Amolecular18450451
AT3G03450AT4G15560negativemetabolismN/AmolecularN/A
AT3G03450AT5G10120negativeotherN/Amolecular17616507
AT3G03450AT5G21120negativeotherN/Amolecular17616507
AT3G03450AT5G40350negativeotherN/Amolecular19325888
AT3G03450AT5G44420PositiveotherN/Amolecular18450451
AT3G03450AT5G65100negativeotherN/Amolecular17616507
AT3G03450DELLA target genesPositiveprotein degradationN/Amutance11118137

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25711
AccessionTaxon
NP_172945Arabidopsis thaliana
NP_178266Arabidopsis thaliana
NP_001051032Oryza sativa Japonica Group
estExt_Genewise1.C_120199Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_175000002Physcomitrella patens subsp. patens
28677.m000055Ricinus communis
29692.m000540Ricinus communis
NP_176809Arabidopsis thaliana
NP_186995 ( AT3G03450 )Arabidopsis thaliana
NP_197251Arabidopsis thaliana
NP_001043705Oryza sativa Japonica Group
29807.m000482Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF120414.700000000000006E-3044112IPR021914Transcriptional factor DELLA, N-terminal
PROSITEPS509850.0154524IPR005202Transcription factor GRAS
PfamPF035140.0180545IPR005202Transcription factor GRAS