You are querying gene by "AT3G02850".

Locus: AT3G02850 Alias: SKOR

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 9741629

Basic gene information ( show / hide contents )

Locus AT3G02850 | Chromosome: 3 | Strand: -
Description response to abscisic acid stimulus
Alias
SKOR( alias )
Gene model
AT3G02850.1 | From: 619685 | To: 623565
Sequence
AT3G02850.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
outward rectifier potassium channel activity PMID: 9741629
cyclic nucleotide binding PMID:
inward rectifier potassium channel activity PMID: 9741629
cellular_component
membrane PMID:
biological_process
potassium ion transport PMID: 9741629
response to abscisic acid stimulus PMID: 9741629
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G02850.1 
length: 2595 
miRNA : ath-miR779.2
length: 21 
 
mfe: -23.7 kcal/mol 
p-value: 0.021732 
 
position  100 
target 5' C                U    U 
           GG CGGCGGAGUUUCU AUCG  
           UC GUUGCUUUAAAGG UAGU  
miRNA  3'    A             U      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12410
AccessionTaxon
NP_186934 ( AT3G02850 )Arabidopsis thaliana
NP_198566Arabidopsis thaliana
168044Chlamydomonas reinhardtii
1100010090Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF005201.0E-13116323IPR005821Ion transport
PRINTSPR014639.499999851064385E-7118128IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014639.499999851064385E-7227237IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014639.499999851064385E-7275292IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014639.499999851064385E-7319328IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
SuperFamilySSF512066.1E-44330522IPR018490Cyclic nucleotide-binding-like
Gene3DG3DSA:2.60.120.109.700017934303865E-29397522IPR014710RmlC-like jelly roll fold
SuperFamilySSF484031.4E-49402737IPR020683Ankyrin repeat-containing domain
SMARTSM001001.1000015067164208E-24403521IPR000595Cyclic nucleotide-binding
PROSITEPS500420.0403523IPR000595Cyclic nucleotide-binding
PfamPF000271.1E-15422509IPR000595Cyclic nucleotide-binding
Gene3DG3DSA:1.25.40.201.9000069431526998E-46552730IPR020683Ankyrin repeat-containing domain
PROSITEPS502970.0552730IPR020683Ankyrin repeat-containing domain
PfamPF000233.7E-4580612IPR002110Ankyrin repeat
SMARTSM002485.399999773511671E-6580609IPR002110Ankyrin repeat
PROSITEPS500880.0580612IPR002110Ankyrin repeat
SMARTSM002480.006099999771262112613642IPR002110Ankyrin repeat
PROSITEPS500880.0613645IPR002110Ankyrin repeat
SMARTSM00248110.00002989614836644673IPR002110Ankyrin repeat
SMARTSM002480.027000003535638622677706IPR002110Ankyrin repeat
PROSITEPS500880.0677709IPR002110Ankyrin repeat
SMARTSM00248500.0000864459345710740IPR002110Ankyrin repeat
PfamPF118342.6000000000000003E-16755824IPR021789Protein of unknown function DUF3354