You are querying gene by "AT3G02260".

Locus: AT3G02260 Alias: ASA1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 11485992

Basic gene information ( show / hide contents )

Locus AT3G02260 | Chromosome: 3 | Strand: -
Description auxin polar transport
ASA1( alias )
BIG( alias )
CRM1( alias )
DOC1( alias )
LPR1( alias )
TIR3( alias )
UMB1( alias )
Gene model
AT3G02260.1 | From: 430991 | To: 448496
AT3G02260.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
zinc ion binding PMID:
binding PMID:
ubiquitin-protein ligase activity PMID:
cellular_component_unknown PMID:
indeterminate inflorescence morphogenesis PMID:
response to auxin stimulus PMID: 11485992
auxin polar transport PMID: 11485992
photomorphogenesis PMID: 8314087
root development PMID: 15681664
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR159c
length: 21 
mfe: -27.0 kcal/mol 
p-value: 0.170531 
position  14513 
target 5' C                 G    U 
miRNA  3'                 A        
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR2938
length: 21 
mfe: -29.0 kcal/mol 
p-value: 0.088737 
position  890 
target 5' U     G             G 
miRNA  3' G     G             G 
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR319c
length: 21 
mfe: -28.4 kcal/mol 
p-value: 0.131159 
position  14513 
target 5' C                 G   A 
miRNA  3' U               A       
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR779.1
length: 21 
mfe: -27.7 kcal/mol 
p-value: 0.084543 
position  3877 
target 5' U      U             U 
miRNA  3'        U         G   U 
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR851-3p
length: 21 
mfe: -27.9 kcal/mol 
p-value: 0.019437 
position  761 
target 5' U      G            G 
miRNA  3' C   A  A            U 
target: AT3G02260.1 
length: 15465 
miRNA : ath-miR870
length: 21 
mfe: -22.4 kcal/mol 
p-value: 0.343857 
position  2847 
target 5' U     U               A 
miRNA  3' C                       
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14191
NP_186875 ( AT3G02260 )Arabidopsis thaliana
e_gw1.42.93.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_310173Physcomitrella patens subsp. patens
29790.m000839Ricinus communis
0300010340Ostreococcus tauri
NP_001062664Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003961e-1715731645IPR013993Zinc finger, N-recognin, metazoa
PROSITEPS511578.49115731644IPR003126Zinc finger, N-recognin
SuperFamilySSF509788.7e-0717752020IPR011046WD40 repeat-like-containing domain
SMARTSM002912.4e-1026122655IPR000433Zinc finger, ZZ-type
PROSITEPS5013511.91526122646IPR000433Zinc finger, ZZ-type
PfamPF005693.4e-0926152647IPR000433Zinc finger, ZZ-type
PROSITEPS01357NA26182645IPR000433Zinc finger, ZZ-type