You are querying gene by "AT3G02140".

Locus: AT3G02140 Alias: AFP4

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - negative regulation of abscisic acid mediated signaling 17195036

Basic gene information ( show / hide contents )

Locus AT3G02140 | Chromosome: 3 | Strand: -
Description negative regulation of abscisic acid mediated signaling
Alias
AFP4( alias )
TMAC2( alias )
Gene model
AT3G02140.1 | From: 385324 | To: 386545
Sequence
AT3G02140.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
nucleus PMID: 17195036
biological_process
response to salt stress PMID: 17195036
negative regulation of abscisic acid mediated signaling PMID: 17195036
response to abscisic acid stimulus PMID: 17195036
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G02140.1 
length: 1222 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.042823 
 
position  848 
target 5' C     C             G 
           GGAGC GACGGGAAAC GA  
           CUUUG UUGUUCUUUG CU  
miRNA  3' A     C          A  A 
 
 
target: AT3G02140.1 
length: 1222 
miRNA : ath-miR847
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.029061 
 
position  261 
target 5' G  G   C             G 
           AU AAG AGAAGAGGA UGA  
           UA UUC UCUUCUCCU ACU  
miRNA  3' G  G   U         C     
 
 
target: AT3G02140.1 
length: 1222 
miRNA : ath-miR863-5p
length: 21 
 
mfe: -21.3 kcal/mol 
p-value: 0.079177 
 
position  826 
target 5' C   U U          G   U 
           UUG G GUCGACGAGA AUG  
           AAC C UAGUUGUUCU UAU  
miRNA  3' U   U            G   U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G02140AT2G36270negativeotherN/AGO/others17195036

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF078979.400000000000029E-3762206IPR012463Protein of unknown function DUF1675
PfamPF078971.9000000000000047E-45206311IPR012463Protein of unknown function DUF1675