You are querying gene by "AT3G01420".

Locus: AT3G01420 Alias: ALPHA-DOX1

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16307367

Basic gene information ( show / hide contents )

Locus AT3G01420 | Chromosome: 3 | Strand: -
Description response to salicylic acid stimulus
Alias
ALPHA-DOX1( alias )
DOX1( alias )
Gene model
AT3G01420.1 | From: 159473 | To: 162844
Sequence
AT3G01420.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
lipoxygenase activity PMID: 10455113
cellular_component
endomembrane system PMID:
biological_process
response to salicylic acid stimulus PMID: 16307367
response to oxidative stress PMID: 12060227
fatty acid alpha-oxidation PMID: 10455113
response to other organism PMID:
cell death PMID: 12060227
lipid metabolic process PMID: 16307367
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G01420.1 
length: 2254 
miRNA : ath-miR397b
length: 21 
 
mfe: -23.8 kcal/mol 
p-value: 0.043207 
 
position  1310 
target 5' A                     A 
           CAUUGAUGAUGUAC CAG GA  
           GUAGUUGCUACGUG GUU CU  
miRNA  3'                A   A    
 
 
target: AT3G01420.1 
length: 2254 
miRNA : ath-miR414
length: 21 
 
mfe: -27.2 kcal/mol 
p-value: 0.004267 
 
position  1687 
target 5' G  U            U   G  G 
           UG ACGAUGGUGAUG GGA GA  
           AC UGCUACUACUAC UCU CU  
miRNA  3'                 U   A    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_29350
AccessionTaxon
NP_177509Arabidopsis thaliana
NP_186791 ( AT3G01420 )Arabidopsis thaliana
NP_001066718Oryza sativa Japonica Group
estExt_gwp_gw1.C_1590017Physcomitrella patens subsp. patens
29654.m000303Ricinus communis
29822.m003379Ricinus communis
29822.m003404Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS502920.081639IPR002007Haem peroxidase, animal
SuperFamilySSF481132.3E-12584605IPR010255Haem peroxidase
PfamPF030981.2000000000000143E-12390609IPR002007Haem peroxidase, animal
Gene3DG3DSA:1.10.640.104.2000346049276625E-106107604IPR002007Haem peroxidase, animal