You are querying gene by "AT3G01080".

Locus: AT3G01080 Alias: AtWRKY58

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction transcription factor 17096590

Basic gene information ( show / hide contents )

Locus AT3G01080 | Chromosome: 3 | Strand: +
Description transcription factor
AtWRKY58( alias )
WRKY58( alias )
Gene model
AT3G01080.1 | From: 25514 | To: 27456
AT3G01080.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID:
nucleus PMID:
regulation of transcription, DNA-dependent PMID: 10785665
regulation of defense response PMID: 17096590
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
wrky58 17096590 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT3G01080.1 
length: 1272 
miRNA : ath-miR399d
length: 21 
mfe: -28.3 kcal/mol 
p-value: 0.006117 
position  100 
target 5' A   C    U             G 
miRNA  3'          U      A        
target: AT3G01080.1 
length: 1272 
miRNA : ath-miR414
length: 21 
mfe: -38.4 kcal/mol 
p-value: 0.000009 
position  782 
target 5' A                     U 
miRNA  3'                         
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM007743.4e-35166224IPR003657DNA-binding WRKY
PfamPF031061.6e-29167223IPR003657DNA-binding WRKY
PROSITEPS5081124.030167225IPR003657DNA-binding WRKY
PROSITEPS5081137.539300365IPR003657DNA-binding WRKY
PfamPF031066.2e-31305363IPR003657DNA-binding WRKY
SMARTSM007741.5e-38305364IPR003657DNA-binding WRKY