You are querying gene by "AT2G47770".

Locus: AT2G47770 Alias: AtTSPO

Hormone Evidence Function category Gene Description PMID
abscisic acidTransgenic Hormone signal transduction Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. 19548979

Basic gene information ( show / hide contents )

Locus AT2G47770 | Chromosome: 2 | Strand: +
Description Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks.
Alias
AtTSPO( alias )
Gene model
AT2G47770.1 | From: 19575534 | To: 19576577
Sequence
AT2G47770.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
integral to membrane PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
OEC1 19548979 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G47770.1 
length: 1044 
miRNA : ath-miR774
length: 21 
 
mfe: -25.8 kcal/mol 
p-value: 0.007360 
 
position  551 
target 5' C     U        U    G U 
           GUGGC UGUAUGGG UGAC G  
           UACCG GUAUACCC AUUG U  
miRNA  3' C                   G U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13036
AccessionTaxon
NP_566110 ( AT2G47770 )Arabidopsis thaliana
143874Chlamydomonas reinhardtii
estExt_fgenesh1_pm.C_3780003Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1490131Physcomitrella patens subsp. patens
30129.m000371Ricinus communis
0500010181Ostreococcus tauri
e_gw1.281.119.1Physcomitrella patens subsp. patens
e_gw1.293.58.1Physcomitrella patens subsp. patens
gw1.403.36.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0058593.599988529077829E-4335196IPR004307TspO/MBR-related protein
PfamPF030731.2000000000000005E-1852193IPR004307TspO/MBR-related protein
PANTHERPTHR100578.900008294181493E-2762190IPR004307TspO/MBR-related protein