You are querying gene by "AT2G47430".

Locus: AT2G47430 Alias: CKI1

Hormone Evidence Function category Gene Description PMID
cytokininMutant Hormone signal transduction Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte 12426401 8875940

Basic gene information ( show / hide contents )

Locus AT2G47430 | Chromosome: 2 | Strand: -
Description Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte
Alias
CKI1( alias )
Gene model
AT2G47430.1 | From: 19466115 | To: 19471157
Sequence
AT2G47430.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
two-component response regulator activity PMID: 10610126
protein histidine kinase activity PMID: 10610126
cellular_component
membrane PMID: 8875940
biological_process
cytokinin mediated signaling PMID: 12068096
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
cki1-1,2,3 8875940 mutant
cki11-5,6 12426401 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G47430.1 
length: 3677 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -21.5 kcal/mol 
p-value: 0.187491 
 
position  2238 
target 5' G    U    G            U 
           GAGA CGAA CAGGAGGC GAU  
           CUUU GCUU GUUCUUUG CUA  
miRNA  3' A                  A     
 
 
target: AT2G47430.1 
length: 3677 
miRNA : ath-miR861-3p
length: 21 
 
mfe: -25.8 kcal/mol 
p-value: 0.018372 
 
position  1609 
target 5' C             C   G   U 
           UUCUUGAAGACGU AUC AUU  
           AGGAACUUCUGUA UAG UAG  
miRNA  3' C                 G     
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G47430AT1G68460negativeotherN/Amutance
AT2G47430AT3G19160negativeotherN/Amutance8875940
AT2G47430AT3G63110negativeotherN/Amutance8875940
AT2G47430AT4G24650negativeotherN/Amutance8875940
AT2G47430AT4G34160PositiveotherN/Amutance12426401

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_58654
AccessionTaxon
NP_182265 ( AT2G47430 )Arabidopsis thaliana
28883.m000728Ricinus communis
30076.m004665Ricinus communis
30128.m008899Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF473841.0E-9385457IPR009082Signal transduction histidine kinase, homodimeric
SMARTSM003885.900001049950954E-12395461IPR003661Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
PfamPF005126.300000000000004E-6396461IPR003661Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
PROSITEPS501090.0402671IPR005467Signal transduction histidine kinase, core
SuperFamilySSF558743.0E-37450681IPR003594ATPase-like, ATP-binding domain
Gene3DG3DSA:3.30.565.105.799996538547805E-25467677IPR003594ATPase-like, ATP-binding domain
PfamPF025182.900000000000006E-26511669IPR003594ATPase-like, ATP-binding domain
SMARTSM003872.6000051765773306E-32511671IPR003594ATPase-like, ATP-binding domain
PRINTSPR003443.5999964343598684E-9595609IPR004358Signal transduction histidine kinase-related protein, C-terminal
PRINTSPR003443.5999964343598684E-9613623IPR004358Signal transduction histidine kinase-related protein, C-terminal
PRINTSPR003443.5999964343598684E-9629647IPR004358Signal transduction histidine kinase-related protein, C-terminal
SuperFamilySSF521725.3E-279831122IPR011006CheY-like
SMARTSM004481.2000011745813376E-269861114IPR001789Signal transduction response regulator, receiver domain
PROSITEPS501100.09871085IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.5000000000000035E-179881108IPR001789Signal transduction response regulator, receiver domain