You are querying gene by "AT2G47190".

Locus: AT2G47190 Alias: ATMYB2

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 12509522

Basic gene information ( show / hide contents )

Locus AT2G47190 | Chromosome: 2 | Strand: +
Description response to salicylic acid stimulus
Alias
ATMYB2( alias )
MYB2( alias )
Gene model
AT2G47190.1 | From: 19383272 | To: 19384601
Sequence
AT2G47190.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 8312738
calmodulin binding PMID: 15569682
transcription activator activity PMID: 9011094
transcription factor activity PMID: 11118137
biological_process
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to water deprivation PMID: 8312738
response to salt stress PMID: 8312738
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 12509522
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G47190.1 
length: 1138 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.014083 
 
position  31 
target 5' U              U   U  C 
           UCUUUCUCUCUAUC CUU UC  
           AGGAGGAGGGAUAG GAG AG  
miRNA  3' G                  U    
 
 
target: AT2G47190.1 
length: 1138 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.012152 
 
position  31 
target 5' U              U   U  C 
           UCUUUCUCUCUAUC CUU UC  
           AGGAGGAGGGAUAG GAG AG  
miRNA  3' G                  U    
 
 
target: AT2G47190.1 
length: 1138 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.013652 
 
position  31 
target 5' U              U   U  C 
           UCUUUCUCUCUAUC CUU UC  
           AGGAGGAGGGAUAG GAG AG  
miRNA  3' G                  U    
 
 
target: AT2G47190.1 
length: 1138 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.012432 
 
position  31 
target 5' U              U   U  C 
           UCUUUCUCUCUAUC CUU UC  
           AGGAGGAGGGAUAG GAG AG  
miRNA  3' G                  U    
 
 
target: AT2G47190.1 
length: 1138 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.014191 
 
position  31 
target 5' U              U   U  C 
           UCUUUCUCUCUAUC CUU UC  
           AGGAGGAGGGAUAG GAG AG  
miRNA  3' G                  U    
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G47190ABRESPositivetransciptN/AGO/othersN/A
AT2G47190AT1G20440PositivetransciptN/AGO/othersN/A
AT2G47190AT1G77120PositivetransciptN/Amolecular12509522
AT2G47190AT2G38050PositivetransciptN/AGO/othersN/A
AT2G47190AT3G23050PositivetransciptN/AGO/othersN/A
AT2G47190AT3G63210PositivetransciptN/AGO/othersN/A
AT2G47190AT5G25610PositivetransciptN/Amolecular12509522

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106418.799964010307813E-11116273IPR015495Myb transcription factor
PROSITEPS512940.01773IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.602.0999980669153556E-152072IPR012287Homeodomain-related
SMARTSM007172.899997178621844E-162171IPR001005SANT, DNA-binding
PfamPF002492.4E-132269IPR014778Myb, DNA-binding
SuperFamilySSF466894.0E-202291IPR009057Homeodomain-like
SMARTSM007176.499993778843953E-1474122IPR001005SANT, DNA-binding
PROSITEPS512940.074124IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002491.7999999999999998E-975118IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.4999997758334065E-1576124IPR012287Homeodomain-related
SuperFamilySSF466896.8E-981131IPR009057Homeodomain-like