You are querying gene by "AT2G46680".

Locus: AT2G46680 Alias: ATHB-7

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 8771791

Basic gene information ( show / hide contents )

Locus AT2G46680 | Chromosome: 2 | Strand: -
Description response to abscisic acid stimulus
Alias
ATHB-7( alias )
ATHB7( alias )
Gene model
AT2G46680.1 | From: 19172473 | To: 19174019
AT2G46680.2 | From: 19172486 | To: 19174019
Sequence
AT2G46680.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G46680.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 7948864
transcription activator activity PMID: 16055682
cellular_component
nucleus PMID:
biological_process
response to water deprivation PMID: 8771791
abscisic acid mediated signaling PMID: 8771791
regulation of transcription, DNA-dependent PMID:
response to abscisic acid stimulus PMID: 8771791
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G46680.1 
length: 1327 
miRNA : ath-miR865-3p
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.000465 
 
position  792 
target 5' U                     C 
           UUGG UGGGUUUGAGGAAGAA  
           AACC AUUUAAACUCCUUUUU  
miRNA  3'      U                  
 
 
target: AT2G46680.2 
length: 1308 
miRNA : ath-miR865-3p
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.000454 
 
position  786 
target 5' U                     C 
           UUGG UGGGUUUGAGGAAGAA  
           AACC AUUUAAACUCCUUUUU  
miRNA  3'      U                  
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_36948
AccessionTaxon
NP_001063736Oryza sativa Japonica Group
NP_001031550Arabidopsis thaliana
NP_182191 ( AT2G46680 )Arabidopsis thaliana
NP_191748Arabidopsis thaliana
27964.m000347Ricinus communis
NP_001047582Oryza sativa Japonica Group
NP_001053446Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.10.10.601.800001492871922E-141192IPR012287Homeodomain-related
Gene3DG3DSA:1.10.10.601.7e-141192IPR012287Homeodomain-related
PROSITEPS500710.02787IPR001356Homeobox
PROSITEPS5007117.6532787IPR001356Homeobox
SuperFamilySSF466893.1E-1728102IPR009057Homeodomain-like
SuperFamilySSF466893.2e-1728102IPR009057Homeodomain-like
SMARTSM003894.999998119564295E-163091IPR001356Homeobox
SMARTSM003897e-163091IPR001356Homeobox
PfamPF000461.7999999999999997E-133285IPR001356Homeobox
PfamPF000462.3e-163285IPR001356Homeobox
PRINTSPR000317.700001713877384E-65867IPR000047Helix-turn-helix motif, lambda-like repressor
PRINTSPR000317.8e-065867IPR000047Helix-turn-helix motif, lambda-like repressor
PROSITEPS000270.06285IPR017970Homeobox, conserved site
PROSITEPS00027NA6285IPR017970Homeobox, conserved site
PRINTSPR000317.700001713877384E-66783IPR000047Helix-turn-helix motif, lambda-like repressor
PRINTSPR000317.8e-066783IPR000047Helix-turn-helix motif, lambda-like repressor
PfamPF021831.4E-887122IPR003106Leucine zipper, homeobox-associated
PfamPF021839.4e-1587131IPR003106Leucine zipper, homeobox-associated