You are querying gene by "AT2G46270".

Locus: AT2G46270 Alias: GBF3

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 8672884

Basic gene information ( show / hide contents )

Locus AT2G46270 | Chromosome: 2 | Strand: +
Description response to abscisic acid stimulus
Alias
GBF3( alias )
Gene model
AT2G46270.1 | From: 19007264 | To: 19010476
AT2G46270.2 | From: 19007264 | To: 19010476
Sequence
AT2G46270.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT2G46270.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
sequence-specific DNA binding PMID: 1373374
transcription factor activity PMID: 11906833
cellular_component
cytosol PMID: 9193069
biological_process
response to abscisic acid stimulus PMID: 8672884
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156a
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.037902 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156b
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.034632 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156c
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.029872 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156d
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.031881 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156e
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.035091 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.1 
length: 1933 
miRNA : ath-miR156f
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.030422 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156a
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.036577 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156b
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.033218 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156c
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.028700 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156d
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.030763 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156e
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.033801 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 
target: AT2G46270.2 
length: 1864 
miRNA : ath-miR156f
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.029363 
 
position  196 
target 5' C       G            A 
           UGCUUAC UUUCUUCU UCA  
           ACGAGUG AGAGAAGA AGU  
miRNA  3' C                C     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_36742
AccessionTaxon
NP_001043766Oryza sativa Japonica Group
NP_182150 ( AT2G46270 )Arabidopsis thaliana
NP_850449Arabidopsis thaliana
NP_001056362Oryza sativa Japonica Group
30174.m008698Ricinus communis
NP_001045768Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF077771.1e-601181IPR012900G-box binding, MFMR
PfamPF077777.699999999999966E-581181IPR012900G-box binding, MFMR
PfamPF001701.0E-17234295IPR011616bZIP transcription factor, bZIP-1
SMARTSM003381.1000015067164207E-21234298IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS502170.0236299IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS000360.0241256IPR004827Basic-leucine zipper (bZIP) transcription factor
PfamPF001701.4e-20257318IPR011616bZIP transcription factor, bZIP-1
SMARTSM003381.2e-21257321IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS5021713.403259322IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS00036NA264279IPR004827Basic-leucine zipper (bZIP) transcription factor