You are querying gene by "AT2G45820".

Locus: AT2G45820 Alias: AT2G45820

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT2G45820 | Chromosome: 2 | Strand: -
Description DNA-binding protein, putative; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal region (InterPro:IPR005516), Remorin, N-terminal region (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: DNA-binding family protein / remorin family protein (TAIR:AT3G61260.1); Has 2170 Blast hits to 1469 proteins in 249 species: Archae - 2; Bacteria - 278; Metazoa - 371; Fungi - 179; Plants - 300; Viruses - 4; Other Eukaryotes - 1036 (source: NCBI BLink).
Alias
AT2G45820( alias )
Gene model
AT2G45820.1 | From: 18870032 | To: 18871765
Sequence
AT2G45820.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G45820.1 
length: 882 
miRNA : ath-miR158a
length: 20 
 
mfe: -24.3 kcal/mol 
p-value: 0.002356 
 
position  801 
target 5' G   C          A     U 
           UGU UUGUUUACAU UUGGG  
           ACG AACAGAUGUA AACCC  
miRNA  3'     A                U 
 
 
target: AT2G45820.1 
length: 882 
miRNA : ath-miR158b
length: 20 
 
mfe: -24.5 kcal/mol 
p-value: 0.001554 
 
position  801 
target 5' G   C          A     U 
           UGU UUGUUUACAU UUGGG  
           ACG AACAGAUGUA AACCC  
miRNA  3'     A                C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27682
AccessionTaxon
NP_182106 ( AT2G45820 )Arabidopsis thaliana
NP_191685Arabidopsis thaliana
30174.m009002Ricinus communis
NP_197764Arabidopsis thaliana
NP_974824Arabidopsis thaliana
NP_001053409Oryza sativa Japonica Group
e_gw1.246.66.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_20040Physcomitrella patens subsp. patens
30147.m013748Ricinus communis
gw1.11.151.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF037667.499999999999999E-202676IPR005518Remorin, N-terminal
PfamPF037631.600000000000001E-3377187IPR005516Remorin, C-terminal