You are querying gene by "AT2G45420".

Locus: AT2G45420 Alias: LBD18

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction LOB DOMAIN-CONTAINING PROTEIN 18 (LBD18); INVOLVED IN: xylem histogenesis; LOCATED IN: nucleus; EXPRESSED IN: tracheary element, sperm cell; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: JLO (JAGGED LATERAL ORGANS) (TAIR:AT4G00220.1); Has 11512 Blast hits to 4742 proteins in 447 species: Archae - 12; Bacteria - 2005; Metazoa - 4652; Fungi - 465; Plants - 3012; Viruses - 142; Other Eukaryotes - 1224 (source: NCBI BLink). 19717544

Basic gene information ( show / hide contents )

Locus AT2G45420 | Chromosome: 2 | Strand: +
Description LOB DOMAIN-CONTAINING PROTEIN 18 (LBD18); INVOLVED IN: xylem histogenesis; LOCATED IN: nucleus; EXPRESSED IN: tracheary element, sperm cell; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: JLO (JAGGED LATERAL ORGANS) (TAIR:AT4G00220.1); Has 11512 Blast hits to 4742 proteins in 447 species: Archae - 12; Bacteria - 2005; Metazoa - 4652; Fungi - 465; Plants - 3012; Viruses - 142; Other Eukaryotes - 1224 (source: NCBI BLink).
Alias
LBD18( alias )
Gene model
AT2G45420.1 | From: 18725422 | To: 18727803
Sequence
AT2G45420.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
lbd18-1 19717544 mutant
lbd16 lbd18 19717544 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27685
AccessionTaxon
NP_187026Arabidopsis thaliana
gw1.157.74.1Physcomitrella patens subsp. patens
gw1.261.12.1Physcomitrella patens subsp. patens
gw1.35.169.1Physcomitrella patens subsp. patens
gw1.61.81.1Physcomitrella patens subsp. patens
30072.m000955Ricinus communis
NP_850436 ( AT2G45420 )Arabidopsis thaliana
NP_001049546Oryza sativa Japonica Group
30174.m008898Ricinus communis
gw1.190.59.1Physcomitrella patens subsp. patens
gw1.42.84.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0381270.01262IPR017394Uncharacterised conserved protein UCP038127, LOB
PROSITEPS508910.036138IPR004883Lateral organ boundaries, LOB
PfamPF031956.499999999999916E-3537137IPR004883Lateral organ boundaries, LOB