You are querying gene by "AT2G44910".

Locus: AT2G44910 Alias: ATHB-4

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702
Mutant Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702
GibberellinTransgenic Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702
Mutant Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702
BrassinosteroidTransgenic Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702
Mutant Hormone signal transduction Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. 19392702

Basic gene information ( show / hide contents )

Locus AT2G44910 | Chromosome: 2 | Strand: -
Description Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome.
Alias
ATHB-4( alias )
ATHB4( alias )
Gene model
AT2G44910.1 | From: 18524962 | To: 18526600
Sequence
AT2G44910.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  auxin     gibberellin     Brassinosteroid  

[   auxin   ]

Genotype PMID Type
35S:ATHB4 19392702 transgenic
athb4-1 hat3-1 19392702 mutant

[   gibberellin   ]

Genotype PMID Type
35S:ATHB4 19392702 transgenic
atbh4-1 hat3-1 19392702 mutant

[   Brassinosteroid   ]

Genotype PMID Type
35S:ATHB4 19392702 transgenic
atbh4-1 hat3-1 19392702 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G44910.1 
length: 957 
miRNA : ath-miR824
length: 21 
 
mfe: -27.9 kcal/mol 
p-value: 0.003011 
 
position  809 
target 5' G             C U    C 
           CCCUUCUUGCGAA G GUCU  
           GGGAAGAGUGUUU C CAGA  
miRNA  3' A             A      U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_56298
AccessionTaxon
NP_182018 ( AT2G44910 )Arabidopsis thaliana
NP_191598Arabidopsis thaliana
NP_001065389Oryza sativa Japonica Group
30174.m008775Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF046189.4e-331125IPR006712HD-ZIP protein, N-terminal
SuperFamilySSF466893.5e-19148224IPR009057Homeodomain-like
PROSITEPS5007117.103158218IPR001356Homeobox
SMARTSM003895e-15160222IPR001356Homeobox
PfamPF000468.1e-16162216IPR001356Homeobox
Gene3DG3DSA:1.10.10.602e-15164216IPR012287Homeodomain-related
PROSITEPS00027NA193216IPR017970Homeobox, conserved site
PfamPF021831.2e-17218260IPR003106Leucine zipper, homeobox-associated
SMARTSM003402.9e-26218261IPR003106Leucine zipper, homeobox-associated