You are querying gene by "AT2G42620".

Locus: AT2G42620 Alias: MAX2

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 16546078

Basic gene information ( show / hide contents )

Locus AT2G42620 | Chromosome: 2 | Strand: +
Description auxin polar transport
Alias
MAX2( alias )
ORE9( alias )
Gene model
AT2G42620.1 | From: 17763217 | To: 17765545
Sequence
AT2G42620.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ubiquitin-protein ligase activity PMID:
cellular_component
nucleus PMID: 17346265
ubiquitin ligase complex PMID: 11487692
SCF ubiquitin ligase complex PMID: 11874909
biological_process
response to water deprivation PMID: 15894742
auxin polar transport PMID: 16546078
ubiquitin-dependent protein catabolic process PMID: 11487692
shoot morphogenesis PMID: 17346265
regulation of meristem organization PMID: 11874909
protein ubiquitination PMID: 11874909
aging PMID: 11487692
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G42620.1 
length: 2329 
miRNA : ath-miR172b*
length: 20 
 
mfe: -24.4 kcal/mol 
p-value: 0.010370 
 
position  936 
target 5' U     G A         A  U 
           GUGAA C UAGUGGUGU GC  
           CACUU G AUUACCACG CG  
miRNA  3'       A A         A    
 
 
target: AT2G42620.1 
length: 2329 
miRNA : ath-miR782
length: 21 
 
mfe: -28.4 kcal/mol 
p-value: 0.005519 
 
position  1004 
target 5' U      G U            C 
           AGGACA U CCAAGGUGUUUG  
           UCUUGU A GGUUCCACAAAC  
miRNA  3' U                     A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70834
AccessionTaxon
NP_565979 ( AT2G42620 )Arabidopsis thaliana
estExt_gwp_gw1.C_1480025Physcomitrella patens subsp. patens
29682.m000601Ricinus communis

No related Cross Link information for this gene.