You are querying gene by "AT2G42430".

Locus: AT2G42430 Alias: ASL18

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). 19717544

Basic gene information ( show / hide contents )

Locus AT2G42430 | Chromosome: 2 | Strand: +
Description LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE).
Alias
ASL18( alias )
LBD16( alias )
Gene model
AT2G42430.1 | From: 17670522 | To: 17672370
Sequence
AT2G42430.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
nucleus PMID: 17259263
biological_process
lateral root formation PMID: 17259263
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
lbd16-1 19717544 mutant
lbd16 lbd18 19717544 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G42430.1 
length: 1104 
miRNA : ath-miR837-3p
length: 21 
 
mfe: -26.4 kcal/mol 
p-value: 0.000058 
 
position  198 
target 5' A      C              C 
           UCAUCA UUUUUUGUUCGUUU  
           GGUAGU AAAAAACAAGCAAA  
miRNA  3'        C                
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70832
AccessionTaxon
NP_565973 ( AT2G42430 )Arabidopsis thaliana
NP_001048543Oryza sativa Japonica Group
29883.m002035Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS508910.014116IPR004883Lateral organ boundaries, LOB
PfamPF031952.1999999999999686E-3315116IPR004883Lateral organ boundaries, LOB