You are querying gene by "AT2G41510".

Locus: AT2G41510 Alias: ATCKX1

Hormone Evidence Function category Gene Description PMID
cytokininTransgenic Hormone metabolism It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. 14555694
GeneOntology - cytokinin dehydrogenase activity

Basic gene information ( show / hide contents )

Locus AT2G41510 | Chromosome: 2 | Strand: +
Description It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Alias
ATCKX1( alias )
CKX1( alias )
Gene model
AT2G41510.1 | From: 17321615 | To: 17324081
Sequence
AT2G41510.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
cytokinin dehydrogenase activity PMID:
cellular_component
vacuole PMID: 14555694
biological_process
meristem development PMID: 17363254
cytokinin catabolic process PMID: 17363254
N-terminal protein myristoylation PMID: 12912986
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes cytokinin dehydrogenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
35S:AtCKX1 14555694 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G41510.1 
length: 1964 
miRNA : ath-miR869.2
length: 21 
 
mfe: -28.0 kcal/mol 
p-value: 0.008500 
 
position  1108 
target 5' G     A               A 
           GUCAA UAUUUCAAC CCAGA  
           CAGUU AUAGAGUUG GGUCU  
miRNA  3'       G         U       
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G41510iPnegativemetabolismN/Atransgenic14555694

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25744
AccessionTaxon
NP_181682 ( AT2G41510 )Arabidopsis thaliana
NP_191903Arabidopsis thaliana
NP_001045353Oryza sativa Japonica Group
NP_001055371Oryza sativa Japonica Group
e_gw1.212.61.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_5950001Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2220021Physcomitrella patens subsp. patens
gw1.152.37.1Physcomitrella patens subsp. patens
gw1.222.17.1Physcomitrella patens subsp. patens
gw1.403.33.1Physcomitrella patens subsp. patens
29614.m000040Ricinus communis
30131.m007255Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561769.2E-4359262IPR016166FAD-binding, type 2
PROSITEPS513870.084262IPR016166FAD-binding, type 2
PfamPF015656.000000000000005E-1888231IPR006094FAD linked oxidase, N-terminal
PROSITEPS008620.088123IPR006093Oxygen oxidoreductase covalent FAD-binding site
PfamPF092652.5000000000000137E-117263539IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
SuperFamilySSF551031.7E-85263540IPR016164FAD-linked oxidase-like, C-terminal