You are querying gene by "AT2G40750".

Locus: AT2G40750 Alias: AtWRKY54

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction transcription factor 17096590

Basic gene information ( show / hide contents )

Locus AT2G40750 | Chromosome: 2 | Strand: -
Description transcription factor
AtWRKY54( alias )
WRKY54( alias )
Gene model
AT2G40750.1 | From: 17007532 | To: 17009546
AT2G40750.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID: 10785665
nucleus PMID:
regulation of transcription, DNA-dependent PMID: 10785665
regulation of defense response PMID: 17096590
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
wrky54 wrky70 17096590 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT2G40750.1 
length: 1337 
miRNA : ath-miR825
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.014649 
position  89 
target 5' A    U         G      A 
miRNA  3' C              A        
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT2G40750Salicylic acidnegativeotherN/Amutance17096590

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40845
NP_181607 ( AT2G40750 )Arabidopsis thaliana
NP_191199Arabidopsis thaliana
NP_001055192Oryza sativa Japonica Group
29729.m002369Ricinus communis
29915.m000479Ricinus communis
NP_001050033Oryza sativa Japonica Group
NP_001060645Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5081120.266146214IPR003657DNA-binding WRKY
SMARTSM007744.7e-36151213IPR003657DNA-binding WRKY
PfamPF031069.4e-24152212IPR003657DNA-binding WRKY