You are querying gene by "AT2G40000".

Locus: AT2G40000 Alias: ATHSPRO2

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 17977154

Basic gene information ( show / hide contents )

Locus AT2G40000 | Chromosome: 2 | Strand: -
Description response to salicylic acid stimulus
Alias
ATHSPRO2( alias )
HSPRO2( alias )
Gene model
AT2G40000.1 | From: 16707588 | To: 16709106
Sequence
AT2G40000.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
response to salicylic acid stimulus PMID: 17977154
defense response to bacterium, incompatible interaction PMID: 17977154
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G40000.1 
length: 1519 
miRNA : ath-miR394a
length: 20 
 
mfe: -27.8 kcal/mol 
p-value: 0.015317 
 
position  501 
target 5' C  C                U 
           GG GGUGGACGGAGU UCG  
           CC CCACCUGUCUUA GGU  
miRNA  3'    U            C   U 
 
 
target: AT2G40000.1 
length: 1519 
miRNA : ath-miR394b
length: 20 
 
mfe: -27.8 kcal/mol 
p-value: 0.010107 
 
position  501 
target 5' C  C                U 
           GG GGUGGACGGAGU UCG  
           CC CCACCUGUCUUA GGU  
miRNA  3'    U            C   U 
 
 
target: AT2G40000.1 
length: 1519 
miRNA : ath-miR781
length: 21 
 
mfe: -21.5 kcal/mol 
p-value: 0.138258 
 
position  879 
target 5' G                    C 
           AAG AUCUGGAAAAUUUUAG  
           UUC UAGGUCUUUUGAGAUU  
miRNA  3' A   A                  
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30399
AccessionTaxon
NP_181529 ( AT2G40000 )Arabidopsis thaliana
NP_191143Arabidopsis thaliana
NP_001044842Oryza sativa Japonica Group
e_gw1.22.190.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_20058Physcomitrella patens subsp. patens
gw1.120.80.1Physcomitrella patens subsp. patens
gw1.28.127.1Physcomitrella patens subsp. patens
gw1.38.245.1Physcomitrella patens subsp. patens
gw1.389.34.1Physcomitrella patens subsp. patens
29669.m000814Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF072314.699999999999919E-831174IPR009869Hs1pro-1, N-terminal
PfamPF070140.0177433IPR009743Hs1pro-1, C-terminal