You are querying gene by "AT2G38470".

Locus: AT2G38470 Alias: ATWRKY33

Hormone Evidence Function category Gene Description PMID
abscisic acidTransgenic Hormone signal transduction Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. 18839316
Mutant Hormone signal transduction Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. 18839316

Basic gene information ( show / hide contents )

Locus AT2G38470 | Chromosome: 2 | Strand: +
Description Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.
Alias
ATWRKY33( alias )
WRKY33( alias )
Gene model
AT2G38470.1 | From: 16115537 | To: 16117844
Sequence
AT2G38470.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 17059405
biological_process
defense response to fungus PMID: 17059405
regulation of transcription, DNA-dependent PMID: 10785665
defense response to bacterium PMID: 17059405
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
wrky33-1 18839316 mutant
wrky25 wrky33 18839316 mutant
35S:WRKY33 18839316 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT2G38470.1 
length: 1902 
miRNA : ath-miR835-5p
length: 21 
 
mfe: -21.1 kcal/mol 
p-value: 0.034921 
 
position  1294 
target 5' A       A             A 
           GUGAGGA ACAUGUG GAGAG  
           UAUUUCU UGUAUAC UUCUU  
miRNA  3' C               G       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_21639
AccessionTaxon
NP_181381 ( AT2G38470 )Arabidopsis thaliana
205718Chlamydomonas reinhardtii
NP_001055252Oryza sativa Japonica Group
gw1.135.38.1Physcomitrella patens subsp. patens
gw1.157.36.1Physcomitrella patens subsp. patens
gw1.35.201.1Physcomitrella patens subsp. patens
29717.m000222Ricinus communis
29820.m001029Ricinus communis
NP_567752Arabidopsis thaliana
NP_849450Arabidopsis thaliana
NP_001060116Oryza sativa Japonica Group
27613.m000639Ricinus communis
29635.m000468Ricinus communis
NP_001044675Oryza sativa Japonica Group
NP_001055828Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_11.0001000193Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM007742.3e-34183241IPR003657DNA-binding WRKY
PfamPF031061.4e-30184241IPR003657DNA-binding WRKY
PROSITEPS5081122.905184242IPR003657DNA-binding WRKY
PROSITEPS5081138.434356421IPR003657DNA-binding WRKY
PfamPF031061e-30361419IPR003657DNA-binding WRKY
SMARTSM007741.8e-38361420IPR003657DNA-binding WRKY